RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TARSL2A2RTX5 802 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 E5RJQ4 531 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 H3BNC9 293 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 H3BQ06 376 aaPredicted RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 ERLIN1O75477 346 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 TADA2AO75478 443 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 AMHP03971 560 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 KRT7P08729 469 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 CCDC130P13994 396 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 GPD1P21695 349 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 LMO2P25791 158 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 SSR1P43307 286 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 FOXK2Q01167 660 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 SLC6A3Q01959 620 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 PDE4CQ08493 712 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 TCF15Q12870 199 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 SMAD2Q15796 467 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 ERCC6LQ2NKX8 1250 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 INTS6LQ5JSJ4 861 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 EFHC1Q5JVL4 640 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 ZFYVE27Q5T4F4 411 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 SWT1Q5T5J6 900 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 C8orf74Q6P047 294 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 ARCQ7LC44 396 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 POLNQ7Z5Q5 900 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 TMEM110Q86TL2 294 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 FAM35AQ86V20 835 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 TTC30AQ86WT1 665 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 KATNAL2Q8IYT4 538 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 DCP1BQ8IZD4 617 aaKnown RBP9.38□□□□□ -0.91
VPS50-207ENST00000458530 SIX6OS1Q8N1H7 587 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 C3orf58Q8NDZ4 430 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 SLC35F5Q8WV83 523 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 KCTD13Q8WZ19 329 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 UBXN6Q9BZV1 441 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 LRRC4Q9HBW1 653 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 PNPLA8Q9NP80 782 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 KRT82Q9NSB4 513 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 CYTH4Q9UIA0 394 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 ADAM28Q9UKQ2 775 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 GVINP1Q7Z2Y8 2422 aa9.38□□□□□ -0.91
VPS50-207ENST00000458530 FAM170AA1A519 330 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 OR6C75A6NL08 312 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 TBKBP1A7MCY6 615 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 H7C4K7 107 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 KRIT1O00522 736 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 ALDH2P05091 517 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 GLI1P08151 1106 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 LINC00271P0C7V0 271 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 ACAT1P24752 427 aaKnown RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 SDC4P31431 198 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 BRCC3P46736 316 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 RPL34P49207 117 aaKnown RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 RGS7P49802 495 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 COPS2P61201 443 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 RPL7AP62424 266 aaKnown RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 C2orf54Q08AI8 447 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SMARCB1Q12824 385 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SMC1AQ14683 1233 aaKnown RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 NFE2Q16621 373 aaPredicted RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 PTPROQ16827 1216 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 LONRF2Q1L5Z9 754 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 MAP9Q49MG5 647 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 C2CD6Q53TS8 623 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 ZNF280DQ6N043 979 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 FAM183BPQ6ZVS7 135 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SLC26A9Q7LBE3 791 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 MTERF4Q7Z6M4 381 aaKnown RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 PHLDB2Q86SQ0 1253 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 FUKQ8N0W3 1084 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 EXD1Q8NHP7 514 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 CCDC26Q8TAB7 109 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SAMD11Q96NU1 681 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 CASD1Q96PB1 797 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 CNPY3Q9BT09 278 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SLITRK6Q9H5Y7 841 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 DMAP1Q9NPF5 467 aaPredicted RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 HOMER3Q9NSC5 361 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 TMEM51Q9NW97 253 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS50-207ENST00000458530 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS50-207ENST00000458530 CHORDC1Q9UHD1 332 aaPredicted RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 FAM50BQ9Y247 325 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 USTQ9Y2C2 406 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 FAN1Q9Y2M0 1017 aa9.37□□□□□ -0.91
VPS50-207ENST00000458530 V9GYY5 206 aaPredicted RBP9.37□□□□□ -0.91
VPS50-207ENST00000458530 C5orf42Q9H799 3197 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 FAM186AA6NE01 2351 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 KIAA1671Q9BY89 1806 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 PDE2AO00408 941 aaPredicted RBP9.36□□□□□ -0.91
VPS50-207ENST00000458530 HSF2BPO75031 334 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 AP1G2O75843 785 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 DDHD2O94830 711 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 OAZ2O95190 189 aa9.36□□□□□ -0.91
VPS50-207ENST00000458530 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.91
VPS50-207ENST00000458530 FGGP02679 453 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 263.3 ms