RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 SF3A3Q12874 501 aaKnown RBP eCLIP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 SCYL2Q6P3W7 929 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 DARS2Q6PI48 645 aaKnown RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 TAX1BP1Q86VP1 789 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 CNPY4Q8N129 248 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PDIK1LQ8N165 341 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PLD5Q8N7P1 536 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 ANKRD52Q8NB46 1076 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 GDAP1Q8TB36 358 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 ZNF670Q9BS34 389 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 C11orf84Q9BUA3 381 aaPredicted RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 PCDH18Q9HCL0 1135 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 XPO7Q9UIA9 1087 aaKnown RBP17.4■□□□□ 0.38
CCDC43-202ENST00000457422 RABGEF1Q9UJ41 708 aa17.4■□□□□ 0.38
CCDC43-202ENST00000457422 SMIM28A0A1B0GU29 152 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 CFAP69A5D8W1 941 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 TREHO43280 583 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 CCDC130P13994 396 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 HDAC4P56524 1084 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 GEMIN4P57678 1058 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 RNASELQ05823 741 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 ADCY1Q08828 1119 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 SPRED3Q2MJR0 410 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 ZC3H12AQ5D1E8 599 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 C1orf228Q6PIY5 440 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 SLC26A9Q7LBE3 791 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 ZC3H18Q86VM9 953 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 PQLC3Q8N755 202 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 DHRS4Q9BTZ2 278 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 SNRNP25Q9BV90 132 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 B3GNT5Q9BYG0 378 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 ACSS3Q9H6R3 686 aa17.39■□□□□ 0.37
CCDC43-202ENST00000457422 SMG5Q9UPR3 1016 aaKnown RBP17.39■□□□□ 0.37
CCDC43-202ENST00000457422 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 KPNA7A9QM74 516 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 DNM1LO00429 736 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 APOL1O14791 398 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 SPTLC1O15269 473 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 MYL3P08590 195 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 FGFR1P11362 822 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 BASP1P80723 227 aaKnown RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 KCNJ11Q14654 390 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CCL14Q16627 93 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 UBXN11Q5T124 520 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 C7orf31Q8N865 590 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 DENND1AQ8TEH3 1009 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CENPIQ92674 756 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 TRABDQ9H4I3 376 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 USP29Q9HBJ7 922 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CHADO15335 359 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 ASMTLO95671 621 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 ADORA2BP29275 332 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CPT1AP50416 773 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 PKN2Q16513 984 aaKnown RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CA9Q16790 459 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 KLHL38Q2WGJ6 581 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 NUGGCQ68CJ6 796 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 FBXO36Q8NEA4 188 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 PCDH19Q8TAB3 1148 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 CLEC4CQ8WTT0 213 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 TGS1Q96RS0 853 aaKnown RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 DNAI2Q9GZS0 605 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 SSU72Q9NP77 194 aaKnown RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 PAK5Q9P286 719 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 Q9Y3F1 56 aa17.38■□□□□ 0.37
CCDC43-202ENST00000457422 USP15Q9Y4E8 981 aaPredicted RBP17.38■□□□□ 0.37
CCDC43-202ENST00000457422 BCLAF3A2AJT9 711 aaKnown RBP17.37■□□□□ 0.37
CCDC43-202ENST00000457422 H7C0C1 242 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 KRT15P19012 456 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 SSTR1P30872 391 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 GNL1P36915 607 aaPredicted RBP17.37■□□□□ 0.37
CCDC43-202ENST00000457422 ACADSBP45954 432 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 SCTRP47872 440 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 ATP5OP48047 213 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 TAF6P49848 677 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 WDR4P57081 412 aaKnown RBP17.37■□□□□ 0.37
CCDC43-202ENST00000457422 BEX3Q00994 111 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 IL9RQ01113 521 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 ADGRD1Q6QNK2 874 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 HSFY1Q96LI6 401 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 SMC6Q96SB8 1091 aa17.37■□□□□ 0.37
CCDC43-202ENST00000457422 H0YHG0 523 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 GSTA1P08263 222 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 TFE3P19532 575 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 LMO2P25791 158 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 HOXC8P31273 242 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 CRYBB1P53674 252 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 BCAR1P56945 870 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 SOX4Q06945 474 aaPredicted RBP17.36■□□□□ 0.37
CCDC43-202ENST00000457422 MTM1Q13496 603 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 EFTUD2Q15029 972 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■■■■□ 22.7
CCDC43-202ENST00000457422 DPYSL2Q16555 572 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 SV2CQ496J9 727 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
CCDC43-202ENST00000457422 C3orf62Q6ZUJ4 267 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms