RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 NCAPHQ15003 741 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 ITPRIPL2Q3MIP1 535 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 ZSCAN23Q3MJ62 389 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TPRG1Q6ZUI0 275 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 CCDC186Q7Z3E2 898 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TTC30AQ86WT1 665 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 RNF139Q8WU17 664 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TFAP2BQ92481 460 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SHC3Q92529 594 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SECISBP2LQ93073 1101 aaKnown RBP12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SPAG5Q96R06 1193 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SLC22A12Q96S37 553 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 CCSER2Q9H7U1 834 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TBC1D17Q9HA65 648 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 C11orf16Q9NQ32 467 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 CNGB3Q9NQW8 809 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SMPD4Q9NXE4 827 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 CLIC5Q9NZA1 410 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 TBC1D14Q9P2M4 693 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 STRIP2Q9ULQ0 834 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 CCL26Q9Y258 94 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 SIT1Q9Y3P8 196 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 USP3Q9Y6I4 520 aa12.94□□□□□ -0.34
C9orf139-201ENST00000457302 A0A1W2PQH9 124 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 KRBA1A5PL33 1030 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 CYP26A1O43174 497 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 COCHO43405 550 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 FBXO21O94952 628 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 OAS1P00973 400 aaKnown RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 TCF3P15923 654 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ZNF18P17022 549 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 RGS7P49802 495 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 POLR2FP61218 127 aaKnown RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 YWHAGP61981 247 aaKnown RBP eCLIP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 COG7P83436 770 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 APBA1Q02410 837 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 RUNX3Q13761 415 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 UBXN2BQ14CS0 331 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 MEA1Q16626 185 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 RAB41Q5JT25 222 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 GPRIN1Q7Z2K8 1008 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 CACNA2D4Q7Z3S7 1137 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 CPA6Q8N4T0 437 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 KIAA1958Q8N8K9 716 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 TTC8Q8TAM2 541 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 OSCP1Q8WVF1 389 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 FAM3CQ92520 227 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ATP2A3Q93084 1043 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ZFYVE19Q96K21 471 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 SIX2Q9NPC8 291 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ABCC13Q9NSE7 274 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 FAM207AQ9NSI2 230 aaPredicted RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 OLA1Q9NTK5 396 aaKnown RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 DNMT3LQ9UJW3 386 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
C9orf139-201ENST00000457302 PIAS3Q9Y6X2 628 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 F5P12259 2224 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 ZDBF2Q9HCK1 2354 aa12.93□□□□□ -0.34
C9orf139-201ENST00000457302 TRIOO75962 3097 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 TICRRQ7Z2Z1 1910 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 E2F8A0AVK6 867 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 FAM170BA6NMN3 283 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 LGALS16A8MUM7 142 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 SART1O43290 800 aaKnown RBP12.92□□□□□ -0.34
C9orf139-201ENST00000457302 NFATC1O95644 943 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 PDGFBP01127 241 aaPredicted RBP12.92□□□□□ -0.34
C9orf139-201ENST00000457302 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 AOC1P19801 751 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 STAT1P42224 750 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 NUBP1P53384 320 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 ADIGQ0VDE8 80 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 SYCP1Q15431 976 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 ZNF77Q15935 545 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 PM20D1Q6GTS8 502 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 PMF1Q6P1K2 205 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 KLHDC10Q6PID8 442 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 RALGPS2Q86X27 583 aaPredicted RBP12.92□□□□□ -0.34
C9orf139-201ENST00000457302 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 STK32AQ8WU08 396 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 IRGQQ8WZA9 623 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 FAM83CQ9BQN1 747 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 OSBPL6Q9BZF3 934 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
C9orf139-201ENST00000457302 GTSE1Q9NYZ3 720 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 CFAP97Q9P2B7 532 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 MUC3AQ02505 3323 aa12.92□□□□□ -0.34
C9orf139-201ENST00000457302 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms