RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 OR52B2Q96RD2 323 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 UBE2TQ9NPD8 197 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ATAD3AQ9NVI7 634 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ANAPC7Q9UJX3 599 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 OPHN1O60890 802 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ABCG1P45844 678 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PHKA2P46019 1235 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 MTTPP55157 894 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PKNOX1P55347 436 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ARHGAP4P98171 946 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PDIA2Q13087 525 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 KCNJ8Q15842 424 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TSNAXIP1Q2TAA8 658 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 INAVAQ3KP66 663 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SH3PXD2AQ5TCZ1 1133 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TRNP1Q6NT89 227 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 FOXR2Q6PJQ5 311 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 RSPH3Q86UC2 560 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CCT7Q99832 543 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SENP7Q9BQF6 1050 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 HERC2P3Q9BVR0 1158 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 OSBPL8Q9BZF1 889 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 MARCH7Q9H992 704 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 WHRNQ9P202 907 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 GMEB1Q9Y692 573 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 TRIM64BA6NI03 449 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SDR42E2A6NKP2 422 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 F8W8V4 182 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 MAGEC1O60732 1142 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 CYP11B1P15538 503 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ADCY8P40145 1251 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 RPL5P46777 297 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 YAP1P46937 504 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 MED21Q13503 144 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SNRNP48Q6IEG0 339 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 FRMD5Q7Z6J6 570 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 FAM114A1Q8IWE2 563 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SYT2Q8N9I0 419 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF564Q8TBZ8 553 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ACDQ96AP0 544 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PIWIL1Q96J94 861 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 NAP1L3Q99457 506 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PAFAH2Q99487 392 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 WDR18Q9BV38 432 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 WDR55Q9H6Y2 383 aaPredicted RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 SEPT11Q9NVA2 429 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 GIN1Q9NXP7 522 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 GPRC5DQ9NZD1 345 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 PPARGC1AQ9UBK2 798 aaKnown RBP4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 ST14Q9Y5Y6 855 aa4.73□□□□□ -1.65
DEPDC1-202ENST00000456315 IGLV3-22A0A075B6J6 115 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TCRBV5S1A1TA0A578 114 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TESPA1A2RU30 521 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TXNDC9O14530 226 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 RGL2O15211 777 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DYNC1LI2O43237 492 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DCXO43602 365 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CAMTA2O94983 1202 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 UQCRFS1P1P0C7P4 283 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SNHG28P0DPA3 235 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC5A1P13866 664 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ITIH2P19823 946 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CETN2P41208 172 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 EIF3EP60228 445 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 KCNC4Q03721 635 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 DLG2Q15700 870 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MMEL1Q495T6 779 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 LDLRAP1Q5SW96 308 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TREML2Q5T2D2 321 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 OGFRL1Q5TC84 451 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PLA2G4FQ68DD2 849 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 SLC9A4Q6AI14 798 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 NANOGNBQ7Z5D8 188 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ARHGAP18Q8N392 663 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MARVELD2Q8N4S9 558 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PQLC3Q8N755 202 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ACTL9Q8TC94 416 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GDPD5Q8WTR4 605 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZUFSPQ96AP4 578 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 HNRNPABQ99729 332 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TAOK3Q9H2K8 898 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 TPK1Q9H3S4 243 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZNF287Q9HBT7 754 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GPCPD1Q9NPB8 672 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PNPOQ9NVS9 261 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AGO1Q9UL18 857 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ACTL7BQ9Y614 415 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 AP4B1Q9Y6B7 739 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PIKFYVEQ9Y2I7 2098 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 BTBD19C9JJ37 291 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 PDHXO00330 501 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ACOT8O14734 319 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 CCNT2O60583 730 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 GUCY1B2O75343 617 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 JRKO75564 520 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ZBED1O96006 694 aa4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 ALDOAP04075 364 aaKnown RBP4.72□□□□□ -1.65
DEPDC1-202ENST00000456315 HOXA13P31271 388 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms