RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 UBE2HP62256 183 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 CUL2Q13617 745 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 DHCR24Q15392 516 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 CCDC40Q4G0X9 1142 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 ZNF394Q53GI3 561 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 PPP1R26Q5T8A7 1209 aaPredicted RBP18.85■□□□□ 0.61
MSH6-207ENST00000456246 ARHGAP17Q68EM7 881 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 KLHL10Q6JEL2 608 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 TTI2Q6NXR4 508 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 KLHDC10Q6PID8 442 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 ADGRG2Q8IZP9 1017 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 ZFRQ96KR1 1074 aaKnown RBP18.85■□□□□ 0.61
MSH6-207ENST00000456246 CDK5RAP1Q96SZ6 601 aaKnown RBP18.85■□□□□ 0.61
MSH6-207ENST00000456246 UBXN6Q9BZV1 441 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 CCSER2Q9H7U1 834 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 GMEB2Q9UKD1 530 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 SPTBN4Q9H254 2564 aa18.85■□□□□ 0.61
MSH6-207ENST00000456246 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.84■□□□□ 0.61
MSH6-207ENST00000456246 P4HA2O15460 535 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 GADD45BO75293 160 aaPredicted RBP18.84■□□□□ 0.61
MSH6-207ENST00000456246 CD44P16070 742 aaKnown RBP18.84■□□□□ 0.61
MSH6-207ENST00000456246 FMO5P49326 533 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 FNTBP49356 437 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 KIF11P52732 1056 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 RAD23BP54727 409 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 PAK1Q13153 545 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 PREPLQ4J6C6 727 aaPredicted RBP18.84■□□□□ 0.61
MSH6-207ENST00000456246 ISM2Q6H9L7 571 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 GPRIN1Q7Z2K8 1008 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 CCDC186Q7Z3E2 898 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 WDR5BQ86VZ2 330 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 CAMKK1Q8N5S9 505 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 SLC4A11Q8NBS3 891 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 NELFBQ8WX92 580 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 ARID3AQ99856 593 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 FBRSL1Q9HCM7 1045 aaKnown RBP18.84■□□□□ 0.61
MSH6-207ENST00000456246 WDR87Q6ZQQ6 2873 aa18.84■□□□□ 0.61
MSH6-207ENST00000456246 PPP1R3GB7ZBB8 358 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 FGFR1OPO95684 399 aaKnown RBP18.83■□□□□ 0.6
MSH6-207ENST00000456246 ADH5P11766 374 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 ATP5C1P36542 298 aaKnown RBP18.83■□□□□ 0.6
MSH6-207ENST00000456246 OPRD1P41143 372 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 LAIR1Q6GTX8 287 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 SYT13Q7L8C5 426 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 ARHGAP18Q8N392 663 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 ZNF276Q8N554 614 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 TATDN2Q93075 761 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 JAKMIP2Q96AA8 810 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 LSM7Q9UK45 103 aaKnown RBP18.83■□□□□ 0.6
MSH6-207ENST00000456246 KIAA1257Q9ULG3 409 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 USP3Q9Y6I4 520 aa18.83■□□□□ 0.6
MSH6-207ENST00000456246 CYP26A1O43174 497 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 BMP6P22004 513 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 GAD2Q05329 585 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 BTBD8Q5XKL5 378 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 NAIF1Q69YI7 327 aaPredicted RBP18.82■□□□□ 0.6
MSH6-207ENST00000456246 PKN3Q6P5Z2 889 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 ANKRD52Q8NB46 1076 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 RPLP0P6Q8NHW5 317 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 NT5C1BQ96P26 610 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 CLIC5Q9NZA1 410 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 CTNND2Q9UQB3 1225 aa18.82■□□□□ 0.6
MSH6-207ENST00000456246 BIN1O00499 593 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 HOXC11O43248 304 aaPredicted RBP18.81■□□□□ 0.6
MSH6-207ENST00000456246 RALAP11233 206 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 MARSP56192 900 aaKnown RBP18.81■□□□□ 0.6
MSH6-207ENST00000456246 SIM2Q14190 667 aaPredicted RBP18.81■□□□□ 0.6
MSH6-207ENST00000456246 GAB4Q2WGN9 574 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 HSF5Q4G112 596 aaPredicted RBP18.81■□□□□ 0.6
MSH6-207ENST00000456246 SGO2Q562F6 1265 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 HEATR6Q6AI08 1181 aaKnown RBP18.81■□□□□ 0.6
MSH6-207ENST00000456246 RHBDF2Q6PJF5 856 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 HTR3DQ70Z44 454 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 PNKPQ96T60 521 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.81■□□□□ 0.6
MSH6-207ENST00000456246 C2orf42Q9NWW7 574 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 HESX1Q9UBX0 185 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 DNMT3LQ9UJW3 386 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 NAGPAQ9UK23 515 aa18.81■□□□□ 0.6
MSH6-207ENST00000456246 A0A1W2PQH9 124 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 LRP3O75074 770 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 APODP05090 189 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 RETP07949 1114 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 VDRP11473 427 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 RARGP13631 454 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 PLA2G4AP47712 749 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 BCAT1P54687 386 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 MRPS21P82921 87 aaKnown RBP18.8■□□□□ 0.6
MSH6-207ENST00000456246 DMWDQ09019 674 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 LY6G5CQ5SRR4 150 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 PRR23BQ6ZRT6 265 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 NUDT18Q6ZVK8 323 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 BBS7Q8IWZ6 715 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 KIAA2013Q8IYS2 634 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 EZH1Q92800 747 aaPredicted RBP18.8■□□□□ 0.6
MSH6-207ENST00000456246 KLF16Q9BXK1 252 aaPredicted RBP18.8■□□□□ 0.6
MSH6-207ENST00000456246 NMUR1Q9HB89 426 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 SPHK2Q9NRA0 654 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 KIAA1468Q9P260 1216 aa18.8■□□□□ 0.6
MSH6-207ENST00000456246 ATG2BQ96BY7 2078 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms