RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 MRPL45Q9BRJ2 306 aaKnown RBP24.7■■□□□ 1.54
PTPRA-208ENST00000455631 SNX25Q9H3E2 840 aa24.7■■□□□ 1.54
PTPRA-208ENST00000455631 FAM124BQ9H5Z6 455 aaPredicted RBP24.7■■□□□ 1.54
PTPRA-208ENST00000455631 TMEM30AQ9NV96 361 aa24.7■■□□□ 1.54
PTPRA-208ENST00000455631 HCN2Q9UL51 889 aa24.7■■□□□ 1.54
PTPRA-208ENST00000455631 APOBEC2Q9Y235 224 aaKnown RBP24.7■■□□□ 1.54
PTPRA-208ENST00000455631 TRIM24O15164 1050 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 BMP15O95972 392 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 GNSP15586 552 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 SYCP2LQ5T4T6 812 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 PDZD8Q8NEN9 1154 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 IPO4Q8TEX9 1081 aaKnown RBP24.69■■□□□ 1.54
PTPRA-208ENST00000455631 ACOX2Q99424 681 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 ZNF518BQ9C0D4 1074 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 ELOVL4Q9GZR5 314 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 CD93Q9NPY3 652 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 SPHK2Q9NRA0 654 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 RAXQ9Y2V3 346 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 PCDHB13Q9Y5F0 798 aa24.69■■□□□ 1.54
PTPRA-208ENST00000455631 PTPRBP23467 1997 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 YWHAQP27348 245 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 GNL1P36915 607 aaPredicted RBP24.68■■□□□ 1.54
PTPRA-208ENST00000455631 GRIK2Q13002 908 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 GRAMD4Q6IC98 578 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 SDE2Q6IQ49 451 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 TMEM25Q86YD3 366 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 OR6B3Q8NGW1 331 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 EPSTI1Q96J88 318 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 STK17AQ9UEE5 414 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 NME7Q9Y5B8 376 aa24.68■■□□□ 1.54
PTPRA-208ENST00000455631 EIF4E1BA6NMX2 242 aaKnown RBP24.67■■□□□ 1.54
PTPRA-208ENST00000455631 IRF1P10914 325 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 IDEP14735 1019 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 MAOBP27338 520 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 GJB2P29033 226 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 DUOXA2Q1HG44 320 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 HECTD3Q5T447 861 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 NUP93Q8N1F7 819 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 ZNF419Q96HQ0 510 aaPredicted RBP24.67■■□□□ 1.54
PTPRA-208ENST00000455631 LRIG1Q96JA1 1093 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 KIF2CQ99661 725 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 FGFBP2Q9BYJ0 223 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 SLC6A17Q9H1V8 727 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 DPEP3Q9H4B8 488 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 OLFML3Q9NRN5 406 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 DNAJC17Q9NVM6 304 aaKnown RBP24.67■■□□□ 1.54
PTPRA-208ENST00000455631 STARD13Q9Y3M8 1113 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 RAD54BQ9Y620 910 aa24.67■■□□□ 1.54
PTPRA-208ENST00000455631 CLDN5O00501 218 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 PTPN1P18031 435 aaKnown RBP24.66■■□□□ 1.54
PTPRA-208ENST00000455631 ALCAMQ13740 583 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 SF3A1Q15459 793 aaKnown RBP24.66■■□□□ 1.54
PTPRA-208ENST00000455631 WDR45BQ5MNZ6 344 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 KIAA1324Q6UXG2 1013 aaKnown RBP24.66■■□□□ 1.54
PTPRA-208ENST00000455631 TOGARAM2Q6ZUX3 1019 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 USP49Q70CQ1 688 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 OVCA2Q8WZ82 227 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 FOXJ1Q92949 421 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 DNAJC19Q96DA6 116 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 BBC3Q96PG8 261 aaPredicted RBP24.66■■□□□ 1.54
PTPRA-208ENST00000455631 NACA2Q9H009 215 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 CD248Q9HCU0 757 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 CCDC39Q9UFE4 941 aa24.66■■□□□ 1.54
PTPRA-208ENST00000455631 PRPF6O94906 941 aaKnown RBP24.65■■□□□ 1.54
PTPRA-208ENST00000455631 RTN3O95197 1032 aaPredicted RBP24.65■■□□□ 1.54
PTPRA-208ENST00000455631 ACACAQ13085 2346 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 SURF1Q15526 300 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 SLCO6A1Q86UG4 719 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 CBWD2Q8IUF1 395 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 SETD7Q8WTS6 366 aaKnown RBP24.65■■□□□ 1.54
PTPRA-208ENST00000455631 SCFD1Q8WVM8 642 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 MRGPRX1Q96LB2 322 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 ZDHHC5Q9C0B5 715 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 CCSER2Q9H7U1 834 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 CHORDC1Q9UHD1 332 aaPredicted RBP24.65■■□□□ 1.54
PTPRA-208ENST00000455631 PCOLCE2Q9UKZ9 415 aa24.65■■□□□ 1.54
PTPRA-208ENST00000455631 ZNF233A6NK53 670 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 MEI4A8MW99 385 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 NEDD8-MDP1E9PL57 170 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 SV2BQ7L1I2 683 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 GLRX5Q86SX6 157 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 WDR49Q8IV35 697 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 WBP2Q969T9 261 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 GABRG3Q99928 467 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 B3GNT5Q9BYG0 378 aa24.64■■□□□ 1.54
PTPRA-208ENST00000455631 CELSR3Q9NYQ7 3312 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 KIAA0391O15091 583 aaKnown RBP24.63■■□□□ 1.53
PTPRA-208ENST00000455631 CBFA2T3O75081 653 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 TACC1O75410 805 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 TUBP50607 506 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 TNNC1P63316 161 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 RRAGBQ5VZM2 374 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 B3GALNT2Q8NCR0 500 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 SCAMP5Q8TAC9 235 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 XPO6Q96QU8 1125 aaKnown RBP24.63■■□□□ 1.53
PTPRA-208ENST00000455631 DUSP9Q99956 384 aaKnown RBP24.63■■□□□ 1.53
PTPRA-208ENST00000455631 SCUBE2Q9NQ36 999 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 CACNA2D2Q9NY47 1150 aa24.63■■□□□ 1.53
PTPRA-208ENST00000455631 SMG1Q96Q15 3661 aaKnown RBP24.63■■□□□ 1.53
PTPRA-208ENST00000455631 APC2O95996 2303 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms