RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CYP26A1O43174 497 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 RNF40O75150 1001 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 GNA14O95837 355 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 PGFP49763 221 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 KIF11P52732 1056 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 CETN1Q12798 172 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 LRMPQ12912 555 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 DHCR24Q15392 516 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 CAMK4Q16566 473 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 PKN3Q6P5Z2 889 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 OTUB2Q96DC9 234 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 CYLDQ9NQC7 956 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 C2orf42Q9NWW7 574 aa22.38■■□□□ 1.17
HMGB3-205ENST00000455596 FAM186AA6NE01 2351 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 CHURC1-FNTBB4DL54 471 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 P4HA2O15460 535 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 ATP5C1P36542 298 aaKnown RBP22.37■■□□□ 1.17
HMGB3-205ENST00000455596 OPRD1P41143 372 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 SLC8A3P57103 927 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 RUBCNQ92622 972 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 NT5C1BQ96P26 610 aa22.37■■□□□ 1.17
HMGB3-205ENST00000455596 SRRTQ9BXP5 876 aaKnown RBP22.37■■□□□ 1.17
HMGB3-205ENST00000455596 FGFR1OPO95684 399 aaKnown RBP22.36■■□□□ 1.17
HMGB3-205ENST00000455596 ADH1CP00326 375 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 HOXA6P31267 233 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 FNTBP49356 437 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 PSEN1P49768 467 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 GOLGA8FQ08AF8 430 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 DMWDQ09019 674 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 GOLGA8DPQ0D2H9 430 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 GAB4Q2WGN9 574 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 SGO2Q562F6 1265 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 CCDC186Q7Z3E2 898 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 LONP2Q86WA8 852 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 ANKRD52Q8NB46 1076 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 UBXN6Q9BZV1 441 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 OSER1Q9NX31 292 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 SMG5Q9UPR3 1016 aaKnown RBP22.36■■□□□ 1.17
HMGB3-205ENST00000455596 SLC8A2Q9UPR5 921 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 USP3Q9Y6I4 520 aa22.36■■□□□ 1.17
HMGB3-205ENST00000455596 A0A1W2PQH9 124 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 IRF1P10914 325 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 RARGP13631 454 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 MARSP56192 900 aaKnown RBP22.35■■□□□ 1.17
HMGB3-205ENST00000455596 HEATR6Q6AI08 1181 aaKnown RBP22.35■■□□□ 1.17
HMGB3-205ENST00000455596 RHBDF2Q6PJF5 856 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 TRIM59Q8IWR1 403 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 UBR7Q8N806 425 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 RPLP0P6Q8NHW5 317 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 CCDC26Q8TAB7 109 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 EZH1Q92800 747 aaPredicted RBP22.35■■□□□ 1.17
HMGB3-205ENST00000455596 KLF16Q9BXK1 252 aaPredicted RBP22.35■■□□□ 1.17
HMGB3-205ENST00000455596 NMUR1Q9HB89 426 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.35■■□□□ 1.17
HMGB3-205ENST00000455596 NCDNQ9UBB6 729 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 NAGPAQ9UK23 515 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 RALGAPA1Q6GYQ0 2036 aa22.35■■□□□ 1.17
HMGB3-205ENST00000455596 VPS13AQ96RL7 3174 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 TBX18O95935 607 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 CCDC192P0DO97 292 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 VDRP11473 427 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 ADH5P11766 374 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 CD19P15391 556 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 CNR2P34972 360 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 EIF2DP41214 584 aaKnown RBP22.34■■□□□ 1.17
HMGB3-205ENST00000455596 BCAT1P54687 386 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 KCNH2Q12809 1159 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 GOLGA7BQ2TAP0 167 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 KLHDC10Q6PID8 442 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 TADA2BQ86TJ2 420 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 PIGZQ86VD9 579 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 BBS7Q8IWZ6 715 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 PPM1KQ8N3J5 372 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 SECISBP2LQ93073 1101 aaKnown RBP22.34■■□□□ 1.17
HMGB3-205ENST00000455596 HESX1Q9UBX0 185 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 TSPAN16Q9UKR8 245 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 RAB23Q9ULC3 237 aa22.34■■□□□ 1.17
HMGB3-205ENST00000455596 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.34■■□□□ 1.17
HMGB3-205ENST00000455596 RALAP11233 206 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 GAD2Q05329 585 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 RAB41Q5JT25 222 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 LY6G5CQ5SRR4 150 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 HTR3DQ70Z44 454 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 SCD5Q86SK9 330 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 WDR5BQ86VZ2 330 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 TTC30AQ86WT1 665 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 ZNF276Q8N554 614 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 LMO3Q8TAP4 145 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 WBP2Q969T9 261 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 ACDQ96AP0 544 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 CDK5RAP1Q96SZ6 601 aaKnown RBP22.33■■□□□ 1.17
HMGB3-205ENST00000455596 CLIC5Q9NZA1 410 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 RWDD2AQ9UIY3 292 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 DNMT3LQ9UJW3 386 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 LSM7Q9UK45 103 aaKnown RBP22.33■■□□□ 1.17
HMGB3-205ENST00000455596 NUDT5Q9UKK9 219 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 KIAA1257Q9ULG3 409 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 PCDHB4Q9Y5E5 795 aa22.33■■□□□ 1.17
HMGB3-205ENST00000455596 XPO1O14980 1071 aaKnown RBP22.32■■□□□ 1.16
HMGB3-205ENST00000455596 AFPP02771 609 aaKnown RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms