RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 ASB5Q8WWX0 329 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 HS6ST2Q96MM7 605 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 C17orf80Q9BSJ5 609 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 SNX15Q9NRS6 342 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 PNPOQ9NVS9 261 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 LPAR3Q9UBY5 353 aa2.74□□□□□ -1.97
LINC02540-201ENST00000455554 G3BP2Q9UN86 482 aaKnown RBP2.74□□□□□ -1.97
LINC02540-201ENST00000455554 ARID4BQ4LE39 1312 aaPredicted RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 NOTCH3Q9UM47 2321 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 A0A087WYN8 130 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 SERINC4A6NH21 518 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 M0R3H8 397 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 ACOT8O14734 319 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 DTNBO60941 627 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 KATNA1O75449 491 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 FGF3P11487 239 aaPredicted RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 KCNA3P22001 575 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 IL6STP40189 918 aaPredicted RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 GUCY2FP51841 1108 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 PGGT1BP53609 377 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 PRKAG1P54619 331 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 HILS1P60008 231 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 PTPN21Q16825 1174 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 MGAT5BQ3V5L5 792 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 CC2D1BQ5T0F9 858 aaKnown RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 PDXDC1Q6P996 788 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 B4GALNT4Q76KP1 1039 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 NR2C2APQ86WQ0 139 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 RAB11FIP4Q86YS3 637 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 MIER2Q8N344 545 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 MESP1Q9BRJ9 268 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 ARHGAP39Q9C0H5 1083 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 TMX1Q9H3N1 280 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 GAR1Q9NY12 217 aaKnown RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 CHPF2Q9P2E5 772 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 ERRFI1Q9UJM3 462 aaPredicted RBP2.73□□□□□ -1.97
LINC02540-201ENST00000455554 TMX2Q9Y320 296 aa2.73□□□□□ -1.97
LINC02540-201ENST00000455554 FER1L4A9Z1Z3 1794 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 CTIFO43310 598 aaKnown RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 S100BP04271 92 aaPredicted RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 XRCC6P12956 609 aaKnown RBP eCLIP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 ATF7P17544 494 aaPredicted RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 TACR3P29371 465 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 UCP3P55916 312 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 WNT3P56703 355 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 EVA1CP58658 441 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 PNMA8AQ86V59 439 aaPredicted RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 CELF5Q8N6W0 485 aaKnown RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 WIPF2Q8TF74 440 aaPredicted RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 TMEM171Q8WVE6 324 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 ATP2A3Q93084 1043 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 PKNOX2Q96KN3 472 aa2.72□□□□□ -1.97
LINC02540-201ENST00000455554 DRG1Q9Y295 367 aaKnown RBP2.72□□□□□ -1.97
LINC02540-201ENST00000455554 H3BUI4 141 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 MYO1CO00159 1063 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 POU2F2P09086 479 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 PDGFRBP09619 1106 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 SLC11A2P49281 568 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 ALDH7A1P49419 539 aaKnown RBP2.71□□□□□ -1.98
LINC02540-201ENST00000455554 CDKN1CP49918 316 aaPredicted RBP2.71□□□□□ -1.98
LINC02540-201ENST00000455554 NKX6-1P78426 367 aaPredicted RBP2.71□□□□□ -1.98
LINC02540-201ENST00000455554 PLS1Q14651 629 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 NFATC4Q14934 902 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 CERCAMQ5T4B2 595 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 CCDC181Q5TID7 509 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 RFX8Q6ZV50 586 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 USP45Q70EL2 814 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 ZNF329Q86UD4 541 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 FBXL14Q8N1E6 418 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 WFIKKN2Q8TEU8 576 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 NUDCD2Q8WVJ2 157 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 NTPCRQ9BSD7 190 aaKnown RBP2.71□□□□□ -1.98
LINC02540-201ENST00000455554 SLC13A1Q9BZW2 595 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 MYLK2Q9H1R3 596 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 HOMER2Q9NSB8 354 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 DECR2Q9NUI1 292 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 TMEM45AQ9NWC5 275 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 SLC52A1Q9NWF4 448 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 PCDHA6Q9UN73 950 aa2.71□□□□□ -1.98
LINC02540-201ENST00000455554 TRIP12Q14669 1992 aaPredicted RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CLIC1O00299 241 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 NTN3O00634 580 aaPredicted RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 INPPL1O15357 1258 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 LINC01565O15544 149 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 TMPRSS11DO60235 418 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 EPN2O95208 641 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CD63P08962 238 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CREB1P16220 341 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 ARRB2P32121 409 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CFHR3Q02985 330 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 SLC14A1Q13336 389 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CCNIQ14094 377 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 KEAP1Q14145 624 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 FAM50AQ14320 339 aaKnown RBP2.7□□□□□ -1.98
LINC02540-201ENST00000455554 HSP90AB2PQ58FF8 381 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 KHDC1LQ5JSQ8 128 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 ODR4Q5SWX8 454 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 DCAF12L1Q5VU92 463 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 GAS2L3Q86XJ1 694 aa2.7□□□□□ -1.98
LINC02540-201ENST00000455554 CERS3Q8IU89 383 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms