RNA–Protein interactions for RNA: ENST00000455313.6

PDXDC1-204, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-204ENST00000455313 FGF18O76093 207 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 URODP06132 367 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 PCK1P35558 622 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 MATKP42679 507 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 ATP13A4Q4VNC1 1196 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 TEX35Q5T0J7 233 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 SDHAF4Q5VUM1 108 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 PM20D1Q6GTS8 502 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 DEFB106AQ8N104 65 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 VPS52Q8N1B4 723 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 FAM172AQ8WUF8 416 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 C8orf48Q96LL4 319 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 CLSTN3Q9BQT9 956 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 DDX23Q9BUQ8 820 aaKnown RBP17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 POPDC2Q9HBU9 364 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 KLHL11Q9NVR0 708 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 PLXNA4Q9HCM2 1894 aa17.5■□□□□ 0.39
PDXDC1-204ENST00000455313 HADHQ16836 314 aaKnown RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SMTNL2Q2TAL5 461 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 DCAF6Q58WW2 860 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 RASIP1Q5U651 963 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SCML4Q8N228 414 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 STKLD1Q8NE28 680 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 C2orf15Q8WU43 125 aaKnown RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 ACSF2Q96CM8 615 aaPredicted RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC2A13Q96QE2 648 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 PLVAPQ9BX97 442 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 RBM12Q9NTZ6 932 aaKnown RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 PCSK1NQ9UHG2 260 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 USP18Q9UMW8 372 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC27A5Q9Y2P5 690 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 COL4A4P53420 1690 aaPredicted RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SOAT2O75908 522 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 LTFP02788 710 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 DESP17661 470 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 DNAJB2P25686 324 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 HDAC4P56524 1084 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 IFRD2Q12894 506 aaPredicted RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 FBXO38Q6PIJ6 1188 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 EXD1Q8NHP7 514 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 IRGQQ8WZA9 623 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 PEBP4Q96S96 227 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 SEPT5Q99719 369 aaPredicted RBP17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 EPC1Q9H2F5 836 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 ZWILCHQ9H900 591 aa17.49■□□□□ 0.39
PDXDC1-204ENST00000455313 CDH23Q9H251 3354 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 KRT1P04264 644 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 FYNP06241 537 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 KRT7P08729 469 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 DUSP4Q13115 394 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 MGAT5BQ3V5L5 792 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 KCNT1Q5JUK3 1230 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 SYPL2Q5VXT5 272 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 CYP4V2Q6ZWL3 525 aaPredicted RBP17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 MTERF4Q7Z6M4 381 aaKnown RBP17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 AUTS2Q8WXX7 1259 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 CENPIQ92674 756 aaPredicted RBP17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 TBCBQ99426 244 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 ZNF638Q14966 1978 aaKnown RBP17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 PLXNA3P51805 1871 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 GREB1Q4ZG55 1949 aa17.48■□□□□ 0.39
PDXDC1-204ENST00000455313 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 ZRANB2O95218 330 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NOS2P35228 1153 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 PITX1P78337 314 aaPredicted RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 KRT17Q04695 432 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 LLGL1Q15334 1064 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC25A52Q3SY17 297 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 ZFYVE27Q5T4F4 411 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 OTUD1Q5VV17 481 aaPredicted RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 CCDC50Q8IVM0 306 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 KLHL23Q8NBE8 558 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NT5C3BQ969T7 300 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NAP1L3Q99457 506 aaPredicted RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 AP1M1Q9BXS5 423 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 CALCOCO1Q9P1Z2 691 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 PI4K2BG5E9Z4 385 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 CAPN9O14815 690 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 TRUB2O95900 331 aaKnown RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 HAPLN1P10915 354 aaPredicted RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 SULT1E1P49888 294 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 SMC1AQ14683 1233 aaKnown RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 C9orf50Q5SZB4 431 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 ADAT2Q7Z6V5 191 aaKnown RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NUP93Q8N1F7 819 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 GPR152Q8TDT2 470 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 NPY6RQ99463 290 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 ZBP1Q9H171 429 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 DDX56Q9NY93 547 aaKnown RBP17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 STAP1Q9ULZ2 295 aa17.47■□□□□ 0.39
PDXDC1-204ENST00000455313 KRIT1O00522 736 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 PRPSAP2O60256 369 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 H2AFXP16104 143 aaPredicted RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 CLUL1Q15846 466 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 STRADAQ7RTN6 431 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 ANKS1BQ7Z6G8 1248 aa17.46■□□□□ 0.39
PDXDC1-204ENST00000455313 SLC13A5Q86YT5 568 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms