RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TRAPPC11Q7Z392 1133 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TMEM25Q86YD3 366 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NT5DC4Q86YG4 428 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SYT12Q8IV01 421 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ETFBKMTQ8IXQ9 262 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GRAMD1CQ8IYS0 662 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MINDY1Q8N5J2 469 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TERB1Q8NA31 727 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KDF1Q8NAX2 398 aaPredicted RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 B3GALNT2Q8NCR0 500 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MYCBPAPQ8TBZ2 947 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CACTINQ8WUQ7 758 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SPATA17Q96L03 361 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 USP28Q96RU2 1077 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PNKPQ96T60 521 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CGRRF1Q99675 332 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MED10Q9BTT4 135 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NUSAP1Q9BXS6 441 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BLZF1Q9H2G9 400 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 IL21RQ9HBE5 538 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OLFML3Q9NRN5 406 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 AGPAT3Q9NRZ7 376 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DNAJC17Q9NVM6 304 aaKnown RBP6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PLK2Q9NYY3 685 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SEL1LQ9UBV2 794 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PILRBQ9UKJ0 227 aa6.37□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TMEM131Q92545 1883 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MUC22E2RYF6 1773 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 IGHV1OR15-9A0A0B4J2B8 117 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 A0A1W2PQF6 199 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 A8MXQ7 604 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PRRT4C9JH25 899 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TNFRSF10BO14763 440 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TGFB1I1O43294 461 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC26A4O43511 780 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SH3BP5O60239 455 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GREM1O60565 184 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 AP1G2O75843 785 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BEST1O76090 585 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ALDH1A2O94788 518 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZIC2O95409 532 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CST3P01034 146 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TCF3P15923 654 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PTPN1P18031 435 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TNNI1P19237 187 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SCP2P22307 547 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ADORA2BP29275 332 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GNL1P36915 607 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GRIA2P42262 883 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ATXN3P54252 364 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NOP14P78316 857 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MRPS21P82921 87 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CYP24A1Q07973 514 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SEMA3BQ13214 749 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 BIRC3Q13489 604 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF699Q32M78 642 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 WDR72Q3MJ13 1102 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC157Q569K6 752 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EOGTQ5NDL2 527 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TDRD10Q5VZ19 366 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SPOPLQ6IQ16 392 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DPH6Q7L8W6 267 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PIP4P1Q86T03 277 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ACOT1Q86TX2 421 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 WDR49Q8IV35 697 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CHPFQ8IZ52 775 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ADGRG2Q8IZP9 1017 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZCCHC9Q8N567 271 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KCTD17Q8N5Z5 321 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TRIML1Q8N9V2 468 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MDM1Q8TC05 714 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF516Q92618 1163 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EXOC4Q96A65 974 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DHX58Q96C10 678 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CRELD1Q96HD1 420 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 C8orf48Q96LL4 319 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLITRK1Q96PX8 696 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ELOVL4Q9GZR5 314 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 NACA2Q9H009 215 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 XYLT2Q9H1B5 865 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CAPN10Q9HC96 672 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 POLMQ9NP87 494 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 OSER1Q9NX31 292 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 DAXXQ9UER7 740 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CCDC39Q9UFE4 941 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 CHORDC1Q9UHD1 332 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 EVLQ9UI08 416 aaPredicted RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SH3BP1Q9Y3L3 701 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 R3HCC1Q9Y3T6 440 aaKnown RBP6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ADAMTS20P59510 1910 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 KALRNO60229 2985 aa6.36□□□□□ -1.39
HLA-DPA3-207ENST00000454398 PTPRBP23467 1997 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 ZNF233A6NK53 670 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 GOLGA8CPA6NN73 597 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 MEI4A8MW99 385 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 WASH3PC4AMC7 463 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 SLC9A3R1O14745 358 aaPredicted RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 HOXC11O43248 304 aaPredicted RBP6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 TLR5O60602 858 aa6.35□□□□□ -1.39
HLA-DPA3-207ENST00000454398 FTH1P19P0C7X4 201 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms