RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 C7orf31Q8N865 590 aa14.39□□□□□ -0.11
UBE2D3-210ENST00000453744 PHF12Q96QT6 1004 aa14.39□□□□□ -0.11
UBE2D3-210ENST00000453744 NUMBLQ9Y6R0 609 aa14.39□□□□□ -0.11
UBE2D3-210ENST00000453744 RNASEH1O60930 286 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 PMLP29590 882 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ABCG1P45844 678 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 SLC5A9Q2M3M2 681 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 RBM44Q6ZP01 1051 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 TTLL6Q8N841 843 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 NLRP4Q96MN2 994 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 TIPINQ9BVW5 301 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 INPP5FQ9Y2H2 1132 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ZC3H11AO75152 810 aaKnown RBP eCLIP14.38□□□□□ -0.113e-19■□□□□ 8.5
UBE2D3-210ENST00000453744 DLDP09622 509 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 KDELR1P24390 212 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 CDK7P50613 346 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 OGDHQ02218 1023 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ZNF667Q5HYK9 610 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 N4BP2L1Q5TBK1 243 aaPredicted RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 NETO2Q8NC67 525 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 CEP41Q9BYV8 373 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ASNSD1Q9NWL6 643 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ADA2Q9NZK5 511 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 TMX2Q9Y320 296 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 SMAPO00193 183 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 KLHL2O95198 593 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 LDHAP00338 332 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 MIPP30301 263 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 SNRPFP62306 86 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 PRAMEP78395 509 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ITGA9Q13797 1035 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 CES3Q6UWW8 571 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 SYTL5Q8TDW5 730 aaPredicted RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 DCAKDQ8WVC6 231 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 PTCD3Q96EY7 689 aaKnown RBP14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 MFSD14AQ96MC6 490 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 RNF146Q9NTX7 359 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 ANKEF1Q9NU02 776 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 LRP5O75197 1615 aa14.38□□□□□ -0.11
UBE2D3-210ENST00000453744 SUPT3HO75486 399 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 ADRA2BP18089 450 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 GARTP22102 1010 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 MRPS22P82650 360 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 EMC2Q15006 297 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 RARS2Q5T160 578 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PPP1R2P3Q6NXS1 205 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 STKLD1Q8NE28 680 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 AGAP3Q96P47 875 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 DHX35Q9H5Z1 703 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 CHCHD3Q9NX63 227 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 SNCAIPQ9Y6H5 919 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 TRAFD1O14545 582 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 CYP1A1P04798 512 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 MMP8P22894 467 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 RBL1P28749 1068 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PKNOX1P55347 436 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 DLG1Q12959 904 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PRKD1Q15139 912 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 DUOXA2Q1HG44 320 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PDPK2PQ6A1A2 396 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 DENND1BQ6P3S1 775 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 DNAAF3Q8N9W5 541 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 VCPIP1Q96JH7 1222 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 USP18Q9UMW8 372 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 TBC1D12O60347 775 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 CCNE2O96020 404 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 NR3C2P08235 984 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 NPR1P16066 1061 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 VCLP18206 1134 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 NCKAP1LP55160 1127 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PHF13Q86YI8 300 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 SLC44A1Q8WWI5 657 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 NLRP7Q8WX94 980 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 CMTM5Q96DZ9 223 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 ANKRD36BP1Q96IX9 119 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 FERMT1Q9BQL6 677 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 MRPL1Q9BYD6 325 aaKnown RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 MMADHCQ9H3L0 296 aaPredicted RBP14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 PNPOQ9NVS9 261 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 COQ4Q9Y3A0 265 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 ADAMTSL3P82987 1691 aa14.37□□□□□ -0.11
UBE2D3-210ENST00000453744 CST3P01034 146 aaPredicted RBP14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 MMP10P09238 476 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 CCND2P30279 289 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 SLC1A6P48664 564 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 FLOT2Q14254 428 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 KRT72Q14CN4 511 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 SLC39A4Q6P5W5 647 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 HACE1Q8IYU2 909 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 SKA1Q96BD8 255 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 CAAP1Q9H8G2 361 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 S100A14Q9HCY8 104 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 CYP26B1Q9NR63 512 aa14.36□□□□□ -0.11
UBE2D3-210ENST00000453744 PLA2G4CQ9UP65 541 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms