RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 TJP2Q9UDY2 1190 aa16.47■□□□□ 0.23
RBM39-219ENST00000453310 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 FAM170AA1A519 330 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 GOLGA6L3A6NEY3 463 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 PAPSS1O43252 624 aaPredicted RBP16.46■□□□□ 0.23
RBM39-219ENST00000453310 OAS1P00973 400 aaKnown RBP16.46■□□□□ 0.23
RBM39-219ENST00000453310 SERPING1P05155 500 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 PFKLP17858 780 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 PSEN1P49768 467 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 TUBP50607 506 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 YWHAGP61981 247 aaKnown RBP eCLIP16.46■□□□□ 0.23
RBM39-219ENST00000453310 ARID5BQ14865 1188 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 FAM78AQ5JUQ0 283 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 HECTD3Q5T447 861 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
RBM39-219ENST00000453310 CNGA4Q8IV77 575 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 CMTM8Q8IZV2 173 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 OR8K1Q8NGG5 319 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 OLIG1Q8TAK6 271 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 ADAMTS19Q8TE59 1207 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 CLEC4CQ8WTT0 213 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 IRGQQ8WZA9 623 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 SMARCD2Q92925 531 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 DNAJC7Q99615 494 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 SYNCQ9H7C4 482 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 ABHD10Q9NUJ1 306 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 OSER1Q9NX31 292 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 NAGPAQ9UK23 515 aa16.46■□□□□ 0.23
RBM39-219ENST00000453310 BZW2Q9Y6E2 419 aaKnown RBP16.46■□□□□ 0.23
RBM39-219ENST00000453310 YJEFN3A6XGL0 299 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 AKR1B15C9JRZ8 316 aaPredicted RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 E7ENQ6 273 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 SART1O43290 800 aaKnown RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 TLR5O60602 858 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ERBB2P04626 1255 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 CKMP06732 381 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 UNGP13051 313 aaPredicted RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 TNFAIP3P21580 790 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 WEE1P30291 646 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 CDC25BP30305 580 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 HNRNPH3P31942 346 aaKnown RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 AVPR1AP37288 418 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ADKP55263 362 aaKnown RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 SNX16P57768 344 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 MTSS1LQ765P7 747 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ERICH1Q86X53 443 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ARID3BQ8IVW6 561 aaPredicted RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 SCUBE3Q8IX30 993 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 MSANTD4Q8NCY6 345 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
RBM39-219ENST00000453310 SLC22A12Q96S37 553 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 CCSER2Q9H7U1 834 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 CLIC5Q9NZA1 410 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 LIMD1Q9UGP4 676 aa16.45■□□□□ 0.22
RBM39-219ENST00000453310 ANHXE9PGG2 379 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 COCHO43405 550 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 PRAMEF12O95522 483 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 OLFM2O95897 454 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 RALAP11233 206 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 RARGP13631 454 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 HDCP19113 662 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 FCARP24071 287 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 CENPCQ03188 943 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 HTR4Q13639 388 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 TSR1Q2NL82 804 aaKnown RBP16.44■□□□□ 0.22
RBM39-219ENST00000453310 BSPRYQ5W0U4 402 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 HFE2Q6ZVN8 426 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 FAM183BPQ6ZVS7 135 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 ST13P5Q8NFI4 369 aaPredicted RBP16.44■□□□□ 0.22
RBM39-219ENST00000453310 SLC30A5Q8TAD4 765 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 FGF14Q92915 247 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 CYP2S1Q96SQ9 504 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 SMG9Q9H0W8 520 aaKnown RBP16.44■□□□□ 0.22
RBM39-219ENST00000453310 TRPV4Q9HBA0 871 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.44■□□□□ 0.22
RBM39-219ENST00000453310 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
RBM39-219ENST00000453310 ARHGAP20Q9P2F6 1191 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 NUMBLQ9Y6R0 609 aa16.44■□□□□ 0.22
RBM39-219ENST00000453310 HELZP42694 1942 aaKnown RBP16.44■□□□□ 0.22
RBM39-219ENST00000453310 DDX3XO00571 662 aaKnown RBP eCLIP16.43■□□□□ 0.221e-17■□□□□ 11
RBM39-219ENST00000453310 LTFP02788 710 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 PLEKP08567 350 aaPredicted RBP16.43■□□□□ 0.22
RBM39-219ENST00000453310 MMP8P22894 467 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 NSFP46459 744 aaKnown RBP16.43■□□□□ 0.22
RBM39-219ENST00000453310 GABRB2P47870 512 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 C2CD6Q53TS8 623 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 BTBD8Q5XKL5 378 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 OR6B2Q6IFH4 312 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 OLFML1Q6UWY5 402 aa16.43■□□□□ 0.22
RBM39-219ENST00000453310 MMS22LQ6ZRQ5 1243 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms