RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 HMGB4Q8WW32 186 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 HPS3Q969F9 1004 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 ZNF518BQ9C0D4 1074 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 XYLT2Q9H1B5 865 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 TNMDQ9H2S6 317 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 DPEP3Q9H4B8 488 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 CAPN10Q9HC96 672 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 KBTBD4Q9NVX7 518 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 COMMD8Q9NX08 183 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 DEC1Q9P2X7 70 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
HERC3-207ENST00000452979 HCN2Q9UL51 889 aa12.39□□□□□ -0.43
HERC3-207ENST00000452979 A0A1W2PQF6 199 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 TBC1D3BA6NDS4 549 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 A8MXQ7 604 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 H0Y626 953 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CLDN5O00501 218 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
HERC3-207ENST00000452979 TRIM16O95361 564 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CAPNS1P04632 268 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 ZDHHC11BP0C7U3 371 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 GABRG2P18507 467 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 TNNI1P19237 187 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 ATICP31939 592 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 TNNC1P63316 161 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 KDSRQ06136 332 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CYP24A1Q07973 514 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 BTBD8Q5XKL5 378 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CNNM4Q6P4Q7 775 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 NUDT18Q6ZVK8 323 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 PAQR9Q6ZVX9 377 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 RABEPKQ7Z6M1 372 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 NAT16Q8N8M0 369 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 ZCCHC14Q8WYQ9 949 aaKnown RBP12.38□□□□□ -0.43
HERC3-207ENST00000452979 ZNF516Q92618 1163 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 KCNK16Q96T55 309 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CGRRF1Q99675 332 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 GZF1Q9H116 711 aaPredicted RBP12.38□□□□□ -0.43
HERC3-207ENST00000452979 VRTNQ9H8Y1 702 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 CD248Q9HCU0 757 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 SPHK2Q9NRA0 654 aa12.38□□□□□ -0.43
HERC3-207ENST00000452979 SPAARA0A1B0GVQ0 90 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 HOXB3P14651 431 aaPredicted RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 NTSR1P30989 418 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 SIM1P81133 766 aaPredicted RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 RPL6Q02878 288 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 CEBPZQ03701 1054 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 DNM1Q05193 864 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 GFPT1Q06210 699 aaPredicted RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 COL9A2Q14055 689 aaPredicted RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 HNRNPDQ14103 355 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 E2F4Q16254 413 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 HTR3DQ70Z44 454 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 TMEM25Q86YD3 366 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 HDDC3Q8N4P3 179 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 ZNF513Q8N8E2 541 aaPredicted RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 TERB1Q8NA31 727 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 RDH13Q8NBN7 331 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 CCDC127Q96BQ5 260 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 AGPAT3Q9NRZ7 376 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
HERC3-207ENST00000452979 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 SH3BP1Q9Y3L3 701 aa12.37□□□□□ -0.43
HERC3-207ENST00000452979 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 ARHGAP33O14559 1287 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 GREM1O60565 184 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 OPHN1O60890 802 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 ZNF217O75362 1048 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 CFIP05156 583 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 CD59P13987 128 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 HOXB2P14652 356 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
HERC3-207ENST00000452979 ATXN3P54252 364 aaPredicted RBP12.36□□□□□ -0.43
HERC3-207ENST00000452979 MYL6P60660 151 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 ZNF33AQ06730 810 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 IFRD2Q12894 506 aaPredicted RBP12.36□□□□□ -0.43
HERC3-207ENST00000452979 SLC14A1Q13336 389 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 C10orf76Q5T2E6 689 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 KIAA1211LQ6NV74 962 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 MIB1Q86YT6 1006 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 C12orf56Q8IXR9 622 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 PDILTQ8N807 584 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 XXYLT1Q8NBI6 393 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 SCFD1Q8WVM8 642 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 WBP2Q969T9 261 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
HERC3-207ENST00000452979 ZNF419Q96HQ0 510 aaPredicted RBP12.36□□□□□ -0.43
HERC3-207ENST00000452979 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 CUEDC2Q9H467 287 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 CCSER2Q9H7U1 834 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 CALCOCO1Q9P1Z2 691 aa12.36□□□□□ -0.43
HERC3-207ENST00000452979 NXF1Q9UBU9 619 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms