RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SPEM2Q0P670 501 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 STIM1Q13586 685 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 10.9
CHD3-206ENST00000452447 ZNF394Q53GI3 561 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 EZH1Q92800 747 aaPredicted RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 ERCC4Q92889 916 aaPredicted RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 FAXDC2Q96IV6 333 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 HEXIM2Q96MH2 286 aaKnown RBP13.62□□□□□ -0.23
CHD3-206ENST00000452447 RAB20Q9NX57 234 aa13.62□□□□□ -0.23
CHD3-206ENST00000452447 EML5Q05BV3 1969 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 CNOT1A5YKK6 2376 aaKnown RBP13.61□□□□□ -0.23
CHD3-206ENST00000452447 GON4LQ3T8J9 2241 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 PRR5-ARHGAP8B1AHC4 643 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 SLC16A3O15427 465 aaKnown RBP13.61□□□□□ -0.23
CHD3-206ENST00000452447 ADH5P11766 374 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 ARHGAP8P85298 464 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 LRRC63Q05C16 580 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 DMC1Q14565 340 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 C2orf27AQ580R0 203 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 ANKRD40Q6AI12 368 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 RHBDF2Q6PJF5 856 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 SPATA20Q8TB22 786 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 WHAMMQ8TF30 809 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 GAB3Q8WWW8 586 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 SEMA4DQ92854 862 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 PNPLA8Q9NP80 782 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 POLR3BQ9NW08 1133 aaPredicted RBP13.61□□□□□ -0.23
CHD3-206ENST00000452447 SCML2Q9UQR0 700 aa13.61□□□□□ -0.23
CHD3-206ENST00000452447 ABCA7Q8IZY2 2146 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 KIAA1549LQ6ZVL6 1849 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 PSMA7O14818 248 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 AXIN1O15169 862 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 LRP3O75074 770 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 IRF1P10914 325 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 ATP5C1P36542 298 aaKnown RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 EIF2DP41214 584 aaKnown RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 SEC13P55735 322 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 GAD2Q05329 585 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 RSPO4Q2I0M5 234 aaPredicted RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 GAB4Q2WGN9 574 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 PPP1R26Q5T8A7 1209 aaPredicted RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 DGLUCYQ7Z3D6 616 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 FAM160A2Q8N612 972 aaPredicted RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 ZFRQ96KR1 1074 aaKnown RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 PNKPQ96T60 521 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 DUSP16Q9BY84 665 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 PARD6AQ9NPB6 346 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 CISHQ9NSE2 258 aa13.6□□□□□ -0.23
CHD3-206ENST00000452447 ARMCX3Q9UH62 379 aaPredicted RBP13.6□□□□□ -0.23
CHD3-206ENST00000452447 TRIM49BA6NDI0 452 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 HHLA1C9JL84 531 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 K7EQS6 105 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 CYP26A1O43174 497 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 APBB3O95704 486 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 TBX18O95935 607 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 APODP05090 189 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 TGM1P22735 817 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 SLC6A11P48066 632 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
CHD3-206ENST00000452447 ANO4Q32M45 955 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 CBWD6Q4V339 395 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 CBWD3Q5JTY5 395 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 CBWD5Q5RIA9 395 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 BTBD8Q5XKL5 378 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 ISM2Q6H9L7 571 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 TSTD1Q8NFU3 115 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 USP33Q8TEY7 942 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 TMEM176AQ96HP8 235 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 FAM124BQ9H5Z6 455 aaPredicted RBP13.59□□□□□ -0.23
CHD3-206ENST00000452447 CYLDQ9NQC7 956 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 DLL3Q9NYJ7 618 aa13.59□□□□□ -0.23
CHD3-206ENST00000452447 CDV3Q9UKY7 258 aaKnown RBP13.59□□□□□ -0.23
CHD3-206ENST00000452447 KAT7O95251 611 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 RARGP13631 454 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 PPP1R2P41236 205 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 PGFP49763 221 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 PSEN1P49768 467 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 KIF11P52732 1056 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 SLC8A3P57103 927 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 MRPS21P82921 87 aaKnown RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 PREPLQ4J6C6 727 aaPredicted RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 TADA2BQ86TJ2 420 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 BBS7Q8IWZ6 715 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 ZC3H3Q8IXZ2 948 aaKnown RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 ELOA2Q8IYF1 753 aaPredicted RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 TATDN2Q93075 761 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 DHTKD1Q96HY7 919 aaPredicted RBP13.58□□□□□ -0.23
CHD3-206ENST00000452447 ARID3AQ99856 593 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 ARHGEF4Q9NR80 690 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 SEMA4GQ9NTN9 838 aa13.58□□□□□ -0.23
CHD3-206ENST00000452447 NAGPAQ9UK23 515 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms