RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 USP8P40818 1118 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 PRKCQQ04759 706 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 FCHO2Q0JRZ9 810 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 GRM2Q14416 872 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 RAB41Q5JT25 222 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 C1orf210Q8IVY1 113 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 ARL14EPQ8N8R7 260 aaPredicted RBP21.02■□□□□ 0.96
COL9A3-202ENST00000452372 NAA15Q9BXJ9 866 aaKnown RBP21.02■□□□□ 0.96
COL9A3-202ENST00000452372 KIF9Q9HAQ2 790 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 CBX8Q9HC52 389 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 GMIPQ9P107 970 aa21.02■□□□□ 0.96
COL9A3-202ENST00000452372 OAS1P00973 400 aaKnown RBP21.01■□□□□ 0.95
COL9A3-202ENST00000452372 CKMP06732 381 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 UCHL3P15374 230 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 PFKPQ01813 784 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 FZD5Q13467 585 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 CCDC186Q7Z3E2 898 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 BPIFB1Q8TDL5 484 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 ZNF606Q8WXB4 792 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 RNF38Q9H0F5 515 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 TLR8Q9NR97 1041 aaKnown RBP21.01■□□□□ 0.95
COL9A3-202ENST00000452372 CCL26Q9Y258 94 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 FHOD1Q9Y613 1164 aa21.01■□□□□ 0.95
COL9A3-202ENST00000452372 FAM170BA6NMN3 283 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 TULP2O00295 520 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 OLFM2O95897 454 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 SP9P0CG40 484 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 GNA15P30679 374 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 GDI1P31150 447 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 PLA2G4AP47712 749 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 TUBP50607 506 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 UBXN1Q04323 297 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 HECTD3Q5T447 861 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 YAF2Q8IY57 180 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 FAM71AQ8IYT1 594 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 SLC35F5Q8WV83 523 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 KCTD13Q8WZ19 329 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 IRF7Q92985 503 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 ERGIC2Q96RQ1 377 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 STK33Q9BYT3 514 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 OSBPL6Q9BZF3 934 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 BRD9Q9H8M2 597 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 ACP6Q9NPH0 428 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 SIK3Q9Y2K2 1263 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 R4GN57 208 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 DCHS1Q96JQ0 3298 aa21■□□□□ 0.95
COL9A3-202ENST00000452372 MYO16Q9Y6X6 1858 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 M0QYV0 167 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 ZNF263O14978 683 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 CHADO15335 359 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 CYP26A1O43174 497 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 MED7O43513 233 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 PGFP49763 221 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 KLK7P49862 253 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 TKTL1P51854 596 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 SLC7A9P82251 487 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 PTK2Q05397 1052 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 RAPGEF1Q13905 1077 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 DRAP1Q14919 205 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-202ENST00000452372 SYCP1Q15431 976 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 MEA1Q16626 185 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 ARHGAP29Q52LW3 1261 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 ZNF687Q8N1G0 1237 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 DNASE1L2Q92874 299 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 GANQ9H2C0 597 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 LRRC4Q9HBW1 653 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 LTB4R2Q9NPC1 389 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 TRPV5Q9NQA5 729 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 ARHGAP26Q9UNA1 814 aa20.99■□□□□ 0.95
COL9A3-202ENST00000452372 THAP12O43422 761 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 TCF3P15923 654 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 CLCN1P35523 988 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 PSEN1P49768 467 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 PM20D1Q6GTS8 502 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 PMF1Q6P1K2 205 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 LUZP1Q86V48 1076 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 SECISBP2LQ93073 1101 aaKnown RBP20.98■□□□□ 0.95
COL9A3-202ENST00000452372 CLDN23Q96B33 292 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 RTN4Q9NQC3 1192 aaKnown RBP20.98■□□□□ 0.95
COL9A3-202ENST00000452372 HEBP1Q9NRV9 189 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 FAM207AQ9NSI2 230 aaPredicted RBP20.98■□□□□ 0.95
COL9A3-202ENST00000452372 THG1LQ9NWX6 298 aaKnown RBP20.98■□□□□ 0.95
COL9A3-202ENST00000452372 DAAM1Q9Y4D1 1078 aa20.98■□□□□ 0.95
COL9A3-202ENST00000452372 HELZP42694 1942 aaKnown RBP20.98■□□□□ 0.95
COL9A3-202ENST00000452372 A0A1W2PQH9 124 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 COCHO43405 550 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 PNMA6AP0CW24 399 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-202ENST00000452372 TARSP26639 723 aaKnown RBP20.97■□□□□ 0.95
COL9A3-202ENST00000452372 GPD2P43304 727 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 BPIFB4P59827 614 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 TPM4P67936 248 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 PLCB2Q00722 1185 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 UBXN2BQ14CS0 331 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 TPRG1Q6ZUI0 275 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 SCD5Q86SK9 330 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 ZNF276Q8N554 614 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 HSFY1Q96LI6 401 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 CCSER2Q9H7U1 834 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 NMUR1Q9HB89 426 aa20.97■□□□□ 0.95
COL9A3-202ENST00000452372 CYLDQ9NQC7 956 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms