RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 VRTNQ9H8Y1 702 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
RFX3-209ENST00000451859 POLR3BQ9NW08 1133 aaPredicted RBP9.2□□□□□ -0.94
RFX3-209ENST00000451859 GMIPQ9P107 970 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 CFAP97Q9P2B7 532 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 CHORDC1Q9UHD1 332 aaPredicted RBP9.2□□□□□ -0.94
RFX3-209ENST00000451859 ARHGAP26Q9UNA1 814 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 CPQQ9Y646 472 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 ABCA7Q8IZY2 2146 aa9.2□□□□□ -0.94
RFX3-209ENST00000451859 TRIM49BA6NDI0 452 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 SOBPA7XYQ1 873 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 IKBKBO14920 756 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 CETN3O15182 167 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 LILRB5O75023 590 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 BEST1O76090 585 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 RTN3O95197 1032 aaPredicted RBP9.19□□□□□ -0.94
RFX3-209ENST00000451859 SMC2O95347 1197 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 FAM163BP0C2L3 166 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 IRF1P10914 325 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 EPB41P11171 864 aaKnown RBP9.19□□□□□ -0.94
RFX3-209ENST00000451859 TDGF1P13385 188 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 YWHAQP27348 245 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 MXI1P50539 228 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 PDE6CP51160 858 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 GALK1P51570 392 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 SLC5A3P53794 718 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 MAP3K7CLP57077 242 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 ZXDBP98169 803 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 AMPD2Q01433 879 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 ZNF394Q53GI3 561 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 TMEM196Q5HYL7 178 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 TCERG1LQ5VWI1 586 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 TAF4BQ92750 862 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 SMARCE1Q969G3 411 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 CEP295NLQ96MC4 621 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 TSG101Q99816 390 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 SMOQ99835 787 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 NIF3L1Q9GZT8 377 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 NACA2Q9H009 215 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 APOBEC3GQ9HC16 384 aaKnown RBP9.19□□□□□ -0.94
RFX3-209ENST00000451859 FBRSL1Q9HCM7 1045 aaKnown RBP9.19□□□□□ -0.94
RFX3-209ENST00000451859 RMND1Q9NWS8 449 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 RAB23Q9ULC3 237 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 ADGRG1Q9Y653 693 aa9.19□□□□□ -0.94
RFX3-209ENST00000451859 K7ESF4 209 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 TRDMT1O14717 391 aaKnown RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 MAPK13O15264 365 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 NFATC1O95644 943 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 OAS1P00973 400 aaKnown RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 FAM200BP0CF97 657 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 TRIM21P19474 475 aaKnown RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 PPP3CCP48454 512 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 NRLP54845 237 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 SEC13P55735 322 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 NR1H3Q13133 447 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 SIM2Q14190 667 aaPredicted RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 NFIL3Q16649 462 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 EDRF1Q3B7T1 1238 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 ZNF658Q5TYW1 1059 aaPredicted RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 KRT39Q6A163 491 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 GPRIN1Q7Z2K8 1008 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 PDZD8Q8NEN9 1154 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 ZMIZ2Q8NF64 920 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 TMEM174Q8WUU8 243 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 NELL1Q92832 810 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 SEMA4DQ92854 862 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 CD101Q93033 1021 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 HHIPQ96QV1 700 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 NT5C1AQ9BXI3 368 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 FAM126AQ9BYI3 521 aaPredicted RBP9.18□□□□□ -0.94
RFX3-209ENST00000451859 EPC1Q9H2F5 836 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 CCSER2Q9H7U1 834 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 TMEM8AQ9HCN3 771 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 GMEB2Q9UKD1 530 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 PCDHA5Q9Y5H7 936 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 LAMA1P25391 3075 aa9.18□□□□□ -0.94
RFX3-209ENST00000451859 PI4KAP42356 2102 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ANTXRLA6NF34 631 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 TNFRSF10BO14763 440 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 CYP26A1O43174 497 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 COCHO43405 550 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 CYP17A1P05093 508 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 DRD1P21728 446 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ID4P47928 161 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 PGFP49763 221 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 PMS1P54277 932 aaKnown RBP9.17□□□□□ -0.94
RFX3-209ENST00000451859 SLC7A9P82251 487 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 KDSRQ06136 332 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 HECTD3Q5T447 861 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ANKRD40Q6AI12 368 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 CEP68Q76N32 757 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.17□□□□□ -0.94
RFX3-209ENST00000451859 UNC93AQ86WB7 457 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 CRYBG2Q8N1P7 616 aa9.17□□□□□ -0.94
RFX3-209ENST00000451859 SYNPOQ8N3V7 929 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms