RNA–Protein interactions for RNA: ENST00000451834.5

CNOT4-207, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNOT4, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-207ENST00000451834 RBM41Q96IZ5 413 aaKnown RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 ELAC2Q9BQ52 826 aaKnown RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 PHACTR1Q9C0D0 580 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 PARVGQ9HBI0 331 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 HOMER3Q9NSC5 361 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 DNMT3BQ9UBC3 853 aaKnown RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 INSL5Q9Y5Q6 135 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 FAM221BA6H8Z2 402 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 A6NHS1 94 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 CHMP2AO43633 222 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 AHCYL1O43865 530 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 HAPLN1P10915 354 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 FSHRP23945 695 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 FLT3P36888 993 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 MAGOHP61326 146 aaKnown RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 SPDYCQ5MJ68 293 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 MFSD6LQ8IWD5 586 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 CASKIN2Q8WXE0 1202 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 MAGOHBQ96A72 148 aaKnown RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 KRT12Q99456 494 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 REEP2Q9BRK0 252 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 NDST4Q9H3R1 872 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 CSNK1G1Q9HCP0 422 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 KMT5AQ9NQR1 393 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 GCNT4Q9P109 453 aa8.36□□□□□ -1.07
CNOT4-207ENST00000451834 NKX1-2Q9UD57 310 aaPredicted RBP8.36□□□□□ -1.07
CNOT4-207ENST00000451834 KRBA1A5PL33 1030 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 H0Y3Z8 333 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ZNF263O14978 683 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ZSCAN9O15535 394 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 TPD52L2O43399 206 aaKnown RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 EXTL3O43909 919 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 KRT16P08779 473 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 PTPN2P17706 415 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ADSSP30520 456 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 GTF2H1P32780 548 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 HOXD13P35453 343 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 VAV2P52735 878 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 PSMD6Q15008 389 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SETDB1Q15047 1291 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 DGKKQ5KSL6 1271 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 GKAP1Q5VSY0 366 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 KLHDC10Q6PID8 442 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 WDR49Q8IV35 697 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 UBR7Q8N806 425 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 FAM81AQ8TBF8 368 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 LARP4BQ92615 738 aaKnown RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 C8orf48Q96LL4 319 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 GORASP1Q9BQQ3 440 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 BHMT2Q9H2M3 363 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 HAUS4Q9H6D7 363 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 RHBDL2Q9NX52 303 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SNTG2Q9NY99 539 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SALL4Q9UJQ4 1053 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 K7ERI5 159 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 FGFR4P22455 802 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ROR1Q01973 937 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ROR2Q01974 943 aaKnown RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SP4Q02446 784 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 PAN2Q504Q3 1202 aaKnown RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ANO7Q6IWH7 933 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ZNF280DQ6N043 979 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 TMEM150AQ86TG1 271 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 ALS2CR12Q96Q35 445 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SLX1AQ9BQ83 275 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 MMADHCQ9H3L0 296 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-207ENST00000451834 RMI1Q9H9A7 625 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.35□□□□□ -1.079e-8■■■■■ 77
CNOT4-207ENST00000451834 FBXL5Q9UKA1 691 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 BLOC1S6Q9UL45 172 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 SNX12Q9UMY4 172 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 EXOC7Q9UPT5 735 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 HYOU1Q9Y4L1 999 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 DOCK6Q96HP0 2047 aa8.35□□□□□ -1.07
CNOT4-207ENST00000451834 CCT8L1PA6NM43 557 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 TRDMT1O14717 391 aaKnown RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 MCM7P33993 719 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 PCK1P35558 622 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 COPB1P53618 953 aaKnown RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 IFFO1Q0D2I5 559 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 ADAM9Q13443 819 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 LRRC23Q53EV4 343 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 CENPPQ6IPU0 288 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 TMC7Q7Z402 723 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 C11orf74Q86VG3 221 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 PHTF2Q8N3S3 785 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 KRI1Q8N9T8 703 aaKnown RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 UHMK1Q8TAS1 419 aaKnown RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 TMC2Q8TDI7 906 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 PCMTD1Q96MG8 357 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 OSBPL9Q96SU4 736 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 MARK1Q9P0L2 795 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 EBF1Q9UH73 591 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 H3BQ06 376 aaPredicted RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 KRT86O43790 486 aa8.34□□□□□ -1.07
CNOT4-207ENST00000451834 USO1O60763 962 aaKnown RBP8.34□□□□□ -1.07
CNOT4-207ENST00000451834 UBOX5O94941 541 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms