RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 BNIPLQ7Z465 357 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 DDX53Q86TM3 631 aaKnown RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 ZDHHC14Q8IZN3 488 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PRELID2Q8N945 189 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 FBXO22Q8NEZ5 403 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CMASQ8NFW8 434 aaPredicted RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TEKT4Q8WW24 435 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 MAIP1Q8WWC4 291 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RAPGEF5Q92565 580 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 FAM149B1Q96BN6 582 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TMEM169Q96HH4 297 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PEBP4Q96S96 227 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 TBCBQ99426 244 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 KRT12Q99456 494 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 NPY6RQ99463 290 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RHOXF2Q9BQY4 288 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 HERPUD2Q9BSE4 406 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 HTATIP2Q9BUP3 242 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 ADAM33Q9BZ11 813 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 OSBPL8Q9BZF1 889 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 RAB6CQ9H0N0 254 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 NGRNQ9NPE2 291 aaKnown RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 AAASQ9NRG9 546 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 CXXC1Q9P0U4 656 aaPredicted RBP11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PCSK1NQ9UHG2 260 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 NR2E1Q9Y466 385 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PTPRDP23468 1912 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 PTPRSQ13332 1948 aa11.75□□□□□ -0.53
NDUFA3-209ENST00000451517 GOLGA6L10A0A0M3HER8 536 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 C3orf70A6NLC5 250 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ADAM12O43184 909 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PRPSAP2O60256 369 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 LTFP02788 710 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 LINC00271P0C7V0 271 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RARAP10276 462 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RALAP11233 206 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 TFE3P19532 575 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PPM1AP35813 382 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 CDKN2BP42772 138 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 GLUD2P49448 558 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SULT1E1P49888 294 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ARSEP51690 589 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC5A3P53794 718 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ARPP19P56211 112 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 KLF1Q13351 362 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SMC1AQ14683 1233 aaKnown RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 BOLA3Q53S33 107 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 DCAF6Q58WW2 860 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 CCDC70Q6NSX1 233 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 C8orf74Q6P047 294 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ADAT2Q7Z6V5 191 aaKnown RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 CCDC50Q8IVM0 306 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SCN4BQ8IWT1 228 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 GPR65Q8IYL9 337 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 FIBCD1Q8N539 461 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 C12orf50Q8NA57 414 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ATAD1Q8NBU5 361 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SCAMP5Q8TAC9 235 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PHOSPHO2Q8TCD6 241 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SP7Q8TDD2 431 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RUBCNQ92622 972 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 ACSF2Q96CM8 615 aaPredicted RBP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PGLYRP2Q96PD5 576 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 PNKPQ96T60 521 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC9A7Q96T83 725 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 LRRC1Q9BTT6 524 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SLITRK6Q9H5Y7 841 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 KLHL11Q9NVR0 708 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RRN3Q9NYV6 651 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 IL37Q9NZH6 218 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 STK39Q9UEW8 545 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 RAB21Q9UL25 225 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 MTUS1Q9ULD2 1270 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 STAP1Q9ULZ2 295 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 CDY1Q9Y6F8 540 aa11.74□□□□□ -0.53
NDUFA3-209ENST00000451517 hCG_1818297A0A087WSY0 165 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 WDR27A2RRH5 827 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 MDM4O15151 490 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 PHF2O75151 1096 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 TUBBP07437 444 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 HAPLN1P10915 354 aaPredicted RBP11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 H2AFXP16104 143 aaPredicted RBP11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 SYN1P17600 705 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 KDELR1P24390 212 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 GPR15P49685 360 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 ROR1Q01973 937 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 KCNT1Q5JUK3 1230 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 ZFYVE27Q5T4F4 411 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms