RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ZNF840PA6NDX5 716 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 DDX3XO00571 662 aaKnown RBP eCLIP13.69□□□□□ -0.226e-17■■■□□ 18.4
VPS33A-202ENST00000451053 PAPSS1O43252 624 aaPredicted RBP13.69□□□□□ -0.22
VPS33A-202ENST00000451053 CCP110O43303 1012 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 AKR1B10O60218 316 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 ABL1P00519 1130 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 ZDHHC11BP0C7U3 371 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 UNGP13051 313 aaPredicted RBP13.69□□□□□ -0.22
VPS33A-202ENST00000451053 GBP2P32456 591 aaPredicted RBP13.69□□□□□ -0.22
VPS33A-202ENST00000451053 DAOAP59103 153 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 C2CD6Q53TS8 623 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 GPR158Q5T848 1215 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 TXNDC8Q6A555 127 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 SCML4Q8N228 414 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 TXLNBQ8N3L3 684 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 PDZD8Q8NEN9 1154 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 OVCA2Q8WZ82 227 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 MRPS31Q92665 395 aaKnown RBP13.69□□□□□ -0.22
VPS33A-202ENST00000451053 MCRS1Q96EZ8 462 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 ZSWIM3Q96MP5 696 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 ASB2Q96Q27 587 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 CHP1Q99653 195 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 LUC7LQ9NQ29 371 aaKnown RBP13.69□□□□□ -0.22
VPS33A-202ENST00000451053 CNGB3Q9NQW8 809 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 OSER1Q9NX31 292 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 TAS2R14Q9NYV8 317 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 CDH7Q9ULB5 785 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
VPS33A-202ENST00000451053 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 YJEFN3A6XGL0 299 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 C2CD4DB7Z1M9 353 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 E7ENQ6 273 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 FBXO21O94952 628 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 EIF4A3P38919 411 aaKnown RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 NSFP46459 744 aaKnown RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 GABRB2P47870 512 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 PPP3CCP48454 512 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 CENPCQ03188 943 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 SPA17Q15506 151 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 ARHGAP15Q53QZ3 475 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 MMS22LQ6ZRQ5 1243 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 FAM183BPQ6ZVS7 135 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 MON1AQ86VX9 555 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 ERICH1Q86X53 443 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 IPO4Q8TEX9 1081 aaKnown RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 PIWIL1Q96J94 861 aaKnown RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 RPGRIP1Q96KN7 1286 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 C11orf70Q9BRQ4 267 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 SLC46A2Q9BY10 475 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 SLITRK6Q9H5Y7 841 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 CCSER2Q9H7U1 834 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 TLR8Q9NR97 1041 aaKnown RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 NAGPAQ9UK23 515 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 EPN1Q9Y6I3 576 aaPredicted RBP13.68□□□□□ -0.22
VPS33A-202ENST00000451053 EYSQ5T1H1 3165 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 DENND4CQ5VZ89 1909 aa13.68□□□□□ -0.22
VPS33A-202ENST00000451053 ANAPC1Q9H1A4 1944 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 TMCO5BA8MYB1 307 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 EIF3CLB5ME19 914 aaKnown RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 NDUFA10O95299 355 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 OAS1P00973 400 aaKnown RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 CCDC175P0C221 793 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 LAMP2P13473 410 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 BMP1P13497 986 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 MMP8P22894 467 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 YWHAGP61981 247 aaKnown RBP eCLIP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 KRT83P78385 493 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 PTP4A2Q12974 167 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 TAF5Q15542 800 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 SNX30Q5VWJ9 437 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 OR6B2Q6IFH4 312 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 ACAD10Q6JQN1 1059 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 OTOP3Q7RTS5 596 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 PHF13Q86YI8 300 aaPredicted RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 TDRD5Q8NAT2 981 aaKnown RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 C18orf8Q96DM3 657 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 SLC22A12Q96S37 553 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 CYP2S1Q96SQ9 504 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 EIF3CQ99613 913 aaKnown RBP13.67□□□□□ -0.22
VPS33A-202ENST00000451053 TASP1Q9H6P5 420 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 SYNCQ9H7C4 482 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 GDE1Q9NZC3 331 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 ADAMTS1Q9UHI8 967 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 USTQ9Y2C2 406 aa13.67□□□□□ -0.22
VPS33A-202ENST00000451053 A0A087X0T9 212 aa13.66□□□□□ -0.22
VPS33A-202ENST00000451053 ZSCAN12O43309 604 aa13.66□□□□□ -0.22
VPS33A-202ENST00000451053 COCHO43405 550 aa13.66□□□□□ -0.22
VPS33A-202ENST00000451053 LCA5LO95447 670 aa13.66□□□□□ -0.22
VPS33A-202ENST00000451053 LTFP02788 710 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms