RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 FAXDC2Q96IV6 333 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 TACO1Q9BSH4 297 aaKnown RBP23.08■■□□□ 1.29
TTC3-210ENST00000450533 KANSL3Q9P2N6 904 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ZFP69BQ9UJL9 534 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 IQANK1A0A1B0GTG1 560 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ATP5HO75947 161 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ARHGAP1Q07960 439 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 TTLL12Q14166 644 aaPredicted RBP23.08■■□□□ 1.29
TTC3-210ENST00000450533 TLDC1Q6P9B6 456 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ACOT1Q86TX2 421 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 CTAGE3PQ8IX95 158 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 CCDC33Q8N5R6 958 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 PQLC3Q8N755 202 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 FAM172AQ8WUF8 416 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ALKBH8Q96BT7 664 aaKnown RBP23.08■■□□□ 1.29
TTC3-210ENST00000450533 CXorf56Q9H5V9 222 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 GBA2Q9HCG7 927 aaPredicted RBP23.08■■□□□ 1.29
TTC3-210ENST00000450533 NOP53Q9NZM5 478 aaKnown RBP23.08■■□□□ 1.29
TTC3-210ENST00000450533 C15orf41Q9Y2V0 281 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 DIAPH2O60879 1101 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 BCAR1P56945 870 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 RBP5P82980 135 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 PPP6R3Q5H9R7 873 aaPredicted RBP23.07■■□□□ 1.28
TTC3-210ENST00000450533 ZNF484Q5JVG2 852 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 ACAP3Q96P50 834 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 LPIN3Q9BQK8 851 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 B3GNT5Q9BYG0 378 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 VPS11Q9H270 941 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 RNF19AQ9NV58 838 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 C2CD2LO14523 706 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 TROVE2P10155 538 aaKnown RBP eCLIP23.07■■□□□ 1.28
TTC3-210ENST00000450533 NEFHP12036 1026 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 EPHB2P29323 1055 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 YWHAZP63104 245 aaKnown RBP23.07■■□□□ 1.28
TTC3-210ENST00000450533 ARMCX2Q7L311 632 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 TTC30AQ86WT1 665 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 PPM1NQ8N819 430 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 PCDH19Q8TAB3 1148 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 MRPL45Q9BRJ2 306 aaKnown RBP23.07■■□□□ 1.28
TTC3-210ENST00000450533 TBC1D10AQ9BXI6 508 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 ITGA11Q9UKX5 1188 aa23.07■■□□□ 1.28
TTC3-210ENST00000450533 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.06■■□□□ 1.28
TTC3-210ENST00000450533 APOL1O14791 398 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 PPEF2O14830 753 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 CHADO15335 359 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 ZBED1O96006 694 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 APRTP07741 180 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 MAP7D3Q8IWC1 876 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 MIS12Q9H081 205 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 PCDH18Q9HCL0 1135 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 TSPAN1O60635 241 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 TSHRP16473 764 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 TFE3P19532 575 aaPredicted RBP23.06■■□□□ 1.28
TTC3-210ENST00000450533 SLC45A4Q5BKX6 768 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 OLFML1Q6UWY5 402 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 CCDC110Q8TBZ0 833 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 AFG1LQ8WV93 481 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 TRIM56Q9BRZ2 755 aaKnown RBP23.06■■□□□ 1.28
TTC3-210ENST00000450533 SNRNP25Q9BV90 132 aaKnown RBP23.06■■□□□ 1.28
TTC3-210ENST00000450533 TSSK1BQ9BXA7 367 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 PAK5Q9P286 719 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 SNX9Q9Y5X1 595 aa23.06■■□□□ 1.28
TTC3-210ENST00000450533 CXorf49A8MYA2 514 aaPredicted RBP23.05■■□□□ 1.28
TTC3-210ENST00000450533 BGNP21810 368 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 PARP6Q2NL67 630 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 CLNKQ7Z7G1 428 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 LONP2Q86WA8 852 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 KIRREL3Q8IZU9 778 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 APOPT1Q96IL0 206 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 MAGEB5Q9BZ81 275 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 GINS2Q9Y248 185 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 CXCL11O14625 94 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 SDC4P31431 198 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 ETV4P43268 484 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 NEK3P51956 506 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 SH2D5Q6ZV89 423 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 LINC01465Q8N7H1 131 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 ZC3H7BQ9UGR2 993 aaKnown RBP23.05■■□□□ 1.28
TTC3-210ENST00000450533 TTLL3Q9Y4R7 772 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 NME7Q9Y5B8 376 aa23.05■■□□□ 1.28
TTC3-210ENST00000450533 TRIM49D1C9J1S8 452 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 ATXN1P54253 815 aaKnown RBP23.04■■□□□ 1.28
TTC3-210ENST00000450533 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 CDHR3Q6ZTQ4 885 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 FAM13CQ8NE31 585 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 KCNV2Q8TDN2 545 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 INPP5DQ92835 1189 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 KHSRPQ92945 711 aaKnown RBP eCLIP23.04■■□□□ 1.284e-7■■■□□ 15.5
TTC3-210ENST00000450533 GEMIN8Q9NWZ8 242 aaKnown RBP23.04■■□□□ 1.28
TTC3-210ENST00000450533 NKX1-2Q9UD57 310 aaPredicted RBP23.04■■□□□ 1.28
TTC3-210ENST00000450533 C2CD2Q9Y426 696 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 TRIP11Q15643 1979 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 SCN1AP35498 2009 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 C2orf71A6NGG8 1288 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 SPDYE5A6NIY4 337 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 HCRTO43612 131 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 PDK2Q15119 407 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 BOLA3Q53S33 107 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 SMYD5Q6GMV2 418 aa23.04■■□□□ 1.28
TTC3-210ENST00000450533 CAND1Q86VP6 1230 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms