RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 DHCR24Q15392 516 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 TCERG1LQ5VWI1 586 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 ARHGAP17Q68EM7 881 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 Q6ZS52 159 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 HTR3DQ70Z44 454 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 ERMP1Q7Z2K6 904 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 CCDC186Q7Z3E2 898 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 ARHGAP18Q8N392 663 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 SEMA4DQ92854 862 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 LOXL4Q96JB6 756 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 NACA2Q9H009 215 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 CLIC5Q9NZA1 410 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 CFAP97Q9P2B7 532 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 HMGXB4Q9UGU5 601 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 EBF1Q9UH73 591 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 SH3BP1Q9Y3L3 701 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 USP3Q9Y6I4 520 aa16.92■□□□□ 0.3
SGCE-208ENST00000450385 PRR5-ARHGAP8B1AHC4 643 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 RNF40O75150 1001 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 BEST1O76090 585 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 EGFP01133 1207 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 RETP07949 1114 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 TNFRSF4P43489 277 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 PLA2G4AP47712 749 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 ARHGAP8P85298 464 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 GAD2Q05329 585 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 IFRD2Q12894 506 aaPredicted RBP16.91■□□□□ 0.3
SGCE-208ENST00000450385 SIM2Q14190 667 aaPredicted RBP16.91■□□□□ 0.3
SGCE-208ENST00000450385 PPP1R26Q5T8A7 1209 aaPredicted RBP16.91■□□□□ 0.3
SGCE-208ENST00000450385 ANKRD52Q8NB46 1076 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 SLC35C1Q96A29 364 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 ZFRQ96KR1 1074 aaKnown RBP16.91■□□□□ 0.3
SGCE-208ENST00000450385 TWNKQ96RR1 684 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 FBRSL1Q9HCM7 1045 aaKnown RBP16.91■□□□□ 0.3
SGCE-208ENST00000450385 FAM49BQ9NUQ9 324 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 GMIPQ9P107 970 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 MAN1B1Q9UKM7 699 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 ZNF510Q9Y2H8 683 aa16.91■□□□□ 0.3
SGCE-208ENST00000450385 MYO16Q9Y6X6 1858 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 CYP17A1P05093 508 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 RALAP11233 206 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 PRKCSHP14314 528 aaPredicted RBP16.9■□□□□ 0.3
SGCE-208ENST00000450385 CD58P19256 250 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 ACO1P21399 889 aaKnown RBP16.9■□□□□ 0.3
SGCE-208ENST00000450385 ADORA2BP29275 332 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 ID4P47928 161 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 RAD23BP54727 409 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 UBE2HP62256 183 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 MORC3Q14149 939 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 DCAF17Q5H9S7 520 aaPredicted RBP16.9■□□□□ 0.3
SGCE-208ENST00000450385 BTBD8Q5XKL5 378 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 RHBDF2Q6PJF5 856 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 SLC4A11Q8NBS3 891 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 TTC16Q8NEE8 873 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 EEF2KMTQ96G04 330 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 PNKPQ96T60 521 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.9■□□□□ 0.3
SGCE-208ENST00000450385 SMPD4Q9NXE4 827 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 DNMT3LQ9UJW3 386 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 LSM7Q9UK45 103 aaKnown RBP16.9■□□□□ 0.3
SGCE-208ENST00000450385 KIAA1549LQ6ZVL6 1849 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 GPR179Q6PRD1 2367 aa16.9■□□□□ 0.3
SGCE-208ENST00000450385 MYO18AQ92614 2054 aaKnown RBP16.9■□□□□ 0.3
SGCE-208ENST00000450385 HOXC11O43248 304 aaPredicted RBP16.89■□□□□ 0.29
SGCE-208ENST00000450385 HRO43593 1189 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 APODP05090 189 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 ADH5P11766 374 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 OPRD1P41143 372 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 GRIA2P42262 883 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 FMO5P49326 533 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 FNTBP49356 437 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 PMS1P54277 932 aaKnown RBP16.89■□□□□ 0.29
SGCE-208ENST00000450385 MARSP56192 900 aaKnown RBP16.89■□□□□ 0.29
SGCE-208ENST00000450385 COG7P83436 770 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 CUL2Q13617 745 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 STILQ15468 1287 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 CBWD6Q4V339 395 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 CBWD3Q5JTY5 395 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 CBWD5Q5RIA9 395 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 TTI2Q6NXR4 508 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 GAB3Q8WWW8 586 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 JAKMIP2Q96AA8 810 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 ELMO3Q96BJ8 720 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 KLF16Q9BXK1 252 aaPredicted RBP16.89■□□□□ 0.29
SGCE-208ENST00000450385 CCSER2Q9H7U1 834 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 SPHK2Q9NRA0 654 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
SGCE-208ENST00000450385 WDR35Q9P2L0 1181 aa16.89■□□□□ 0.29
SGCE-208ENST00000450385 PPP1R3GB7ZBB8 358 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 K7EQS6 105 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 APBB3O95704 486 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 PAEPP09466 180 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 LMNB2Q03252 620 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 ORC1Q13415 861 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 PUM1Q14671 1186 aaKnown RBP eCLIP16.88■□□□□ 0.29
SGCE-208ENST00000450385 E2F5Q15329 346 aa16.88■□□□□ 0.29
SGCE-208ENST00000450385 GAB4Q2WGN9 574 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms