RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 GPRIN1Q7Z2K8 1008 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 TADA2BQ86TJ2 420 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 ADGRG2Q8IZP9 1017 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 SRRTQ9BXP5 876 aaKnown RBP16.36■□□□□ 0.21
LIMS1-210ENST00000449684 NCDNQ9UBB6 729 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 HESX1Q9UBX0 185 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 NAGPAQ9UK23 515 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 HELZP42694 1942 aaKnown RBP16.36■□□□□ 0.21
LIMS1-210ENST00000449684 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
LIMS1-210ENST00000449684 DMDP11532 3685 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 ZDHHC11BP0C7U3 371 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 RALAP11233 206 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 RARGP13631 454 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 PSEN1P49768 467 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 DHCR24Q15392 516 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 SGO2Q562F6 1265 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 BTBD8Q5XKL5 378 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 PPM1KQ8N3J5 372 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 RUBCNQ92622 972 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 OTUB2Q96DC9 234 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 FBRSL1Q9HCM7 1045 aaKnown RBP16.35■□□□□ 0.21
LIMS1-210ENST00000449684 LSM7Q9UK45 103 aaKnown RBP16.35■□□□□ 0.21
LIMS1-210ENST00000449684 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.35■□□□□ 0.21
LIMS1-210ENST00000449684 FAM186AA6NE01 2351 aa16.35■□□□□ 0.21
LIMS1-210ENST00000449684 A0A1W2PQH9 124 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 CHURC1-FNTBB4DL54 471 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 HHLA1C9JL84 531 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 P4HA2O15460 535 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 TBX18O95935 607 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 AFPP02771 609 aaKnown RBP16.34■□□□□ 0.21
LIMS1-210ENST00000449684 CYP17A1P05093 508 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 ADH5P11766 374 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 FNTBP49356 437 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 KIF11P52732 1056 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 TPD52L1Q16890 204 aaPredicted RBP16.34■□□□□ 0.21
LIMS1-210ENST00000449684 GOLGA7BQ2TAP0 167 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 C10orf120Q5SQS8 335 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 ARHGAP17Q68EM7 881 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 NAIF1Q69YI7 327 aaPredicted RBP16.34■□□□□ 0.21
LIMS1-210ENST00000449684 PRR23BQ6ZRT6 265 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 ANKRD52Q8NB46 1076 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 NELL1Q92832 810 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 CDK5RAP1Q96SZ6 601 aaKnown RBP16.34■□□□□ 0.21
LIMS1-210ENST00000449684 DNMT3LQ9UJW3 386 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 SMG5Q9UPR3 1016 aaKnown RBP16.34■□□□□ 0.21
LIMS1-210ENST00000449684 PCDHB4Q9Y5E5 795 aa16.34■□□□□ 0.21
LIMS1-210ENST00000449684 FANCMQ8IYD8 2048 aa16.33■□□□□ 0.21
LIMS1-210ENST00000449684 PMM2O15305 246 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 LILRB5O75023 590 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 PAPSS2O95340 614 aaPredicted RBP16.33■□□□□ 0.2
LIMS1-210ENST00000449684 VDRP11473 427 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 TDGF1P13385 188 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 BCAT1P54687 386 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 GAD2Q05329 585 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 KCNH2Q12809 1159 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 ANO4Q32M45 955 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 TMEM270Q6UE05 265 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 CEP68Q76N32 757 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 LONP2Q86WA8 852 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 ARHGAP18Q8N392 663 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 ACDQ96AP0 544 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 EPC1Q9H2F5 836 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 RWDD2AQ9UIY3 292 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 GMEB2Q9UKD1 530 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 NUDT5Q9UKK9 219 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 TSPAN16Q9UKR8 245 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 KIAA1257Q9ULG3 409 aa16.33■□□□□ 0.2
LIMS1-210ENST00000449684 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 K7ESF4 209 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 APODP05090 189 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 CNR2P34972 360 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PLA2G4AP47712 749 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PGFP49763 221 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 SEC13P55735 322 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 BST2Q10589 180 aaKnown RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 SIM2Q14190 667 aaPredicted RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PREPLQ4J6C6 727 aaPredicted RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 LY6G5CQ5SRR4 150 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PKN3Q6P5Z2 889 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 NUDT18Q6ZVK8 323 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 MIB1Q86YT6 1006 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 TRIM59Q8IWR1 403 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 SUMF1Q8NBK3 374 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 EHBP1Q8NDI1 1231 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 ATG2BQ96BY7 2078 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 ZFRQ96KR1 1074 aaKnown RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PNKPQ96T60 521 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 NMUR1Q9HB89 426 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.32■□□□□ 0.2
LIMS1-210ENST00000449684 MYO16Q9Y6X6 1858 aa16.32■□□□□ 0.2
LIMS1-210ENST00000449684 PAEPP09466 180 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms