RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 SNX30Q5VWJ9 437 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 C1orf228Q6PIY5 440 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 SASS6Q6UVJ0 657 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 GBP6Q6ZN66 633 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 ASCL5Q7RTU5 278 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 CCDC186Q7Z3E2 898 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 DDX42Q86XP3 938 aaKnown RBP eCLIP12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 ZNF687Q8N1G0 1237 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 UBA3Q8TBC4 463 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 TFAP2BQ92481 460 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 NMUR1Q9HB89 426 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 UBE2TQ9NPD8 197 aaPredicted RBP12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 SAMSN1Q9NSI8 373 aaKnown RBP12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 SPATA6Q9NWH7 488 aaPredicted RBP12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 OSER1Q9NX31 292 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 NAGPAQ9UK23 515 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
LSP1P3-201ENST00000449530 GTPBP10A4D1E9 387 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 M0QYV0 167 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 RNF225M0QZC1 329 aaPredicted RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 PES1O00541 588 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 XPO1O14980 1071 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 SETSIPP0DME0 302 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 SLC9A1P19634 815 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 MAGEA9P43362 315 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 RPS9P46781 194 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 TKTL1P51854 596 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 ZNF132P52740 706 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 ADIGQ0VDE8 80 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 LRRC32Q14392 662 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 EXOC3L4Q17RC7 722 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 CHFRQ96EP1 664 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 ZFRQ96KR1 1074 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 ZSWIM1Q9BR11 485 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 RBM12Q9NTZ6 932 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 KIAA1257Q9ULG3 409 aa12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
LSP1P3-201ENST00000449530 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 MDM4O15151 490 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 NFATC1O95644 943 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 TBX18O95935 607 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 RARGP13631 454 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 PON1P27169 355 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 MFAP3P55082 362 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 FZD5Q13467 585 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 ARHGAP44Q17R89 818 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 CT47A1Q5JQC4 288 aaPredicted RBP12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 RAB41Q5JT25 222 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 MIIPQ5JXC2 388 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 C10orf120Q5SQS8 335 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 NAIF1Q69YI7 327 aaPredicted RBP12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 LCLAT1Q6UWP7 414 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 C1orf210Q8IVY1 113 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 SECISBP2LQ93073 1101 aaKnown RBP12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 LINC00597Q9H2U6 94 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 CHRDQ9H2X0 955 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 LMAN1LQ9HAT1 526 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 LRRC4Q9HBW1 653 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 CYLDQ9NQC7 956 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 TAB2Q9NYJ8 693 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 TMEM63CQ9P1W3 806 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 APEX2Q9UBZ4 518 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 AJAP1Q9UKB5 411 aaPredicted RBP12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 SH3BP1Q9Y3L3 701 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
LSP1P3-201ENST00000449530 CACNA1IQ9P0X4 2223 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 MYOFQ9NZM1 2061 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 SLC9A3R1O14745 358 aaPredicted RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 LAMTOR5O43504 91 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 CYP17A1P05093 508 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 CHRNB1P11230 501 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 RALAP11233 206 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 EEF1GP26641 437 aaKnown RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 GJA4P35212 333 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 USP8P40818 1118 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 PLA2G4AP47712 749 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 PSEN1P49768 467 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 RGS7P49802 495 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 AMPD2Q01433 879 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 MTAPQ13126 283 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 STILQ15468 1287 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 PKDCCQ504Y2 493 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 TCP11X2Q5H9J9 407 aa12.54□□□□□ -0.4
LSP1P3-201ENST00000449530 FSTL4Q6MZW2 842 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms