RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 KBTBD6Q86V97 674 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 TTC39CQ8N584 583 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 C12orf29Q8N999 325 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 FAXDC2Q96IV6 333 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 ZC3H10Q96K80 434 aaKnown RBP11.43□□□□□ -0.58
SRRT-205ENST00000449389 TWNKQ96RR1 684 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 APOBEC3GQ9HC16 384 aaKnown RBP11.43□□□□□ -0.58
SRRT-205ENST00000449389 GDPD2Q9HCC8 539 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 TMEM8AQ9HCN3 771 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 PNPLA8Q9NP80 782 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 TLR8Q9NR97 1041 aaKnown RBP11.43□□□□□ -0.58
SRRT-205ENST00000449389 RMND1Q9NWS8 449 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 MMP17Q9ULZ9 603 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 PCDHGA5Q9Y5G8 931 aa11.43□□□□□ -0.58
SRRT-205ENST00000449389 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.42□□□□□ -0.58
SRRT-205ENST00000449389 SLC30A4O14863 429 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 CETN3O15182 167 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 TLR5O60602 858 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 CILPO75339 1184 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 KAT7O95251 611 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
SRRT-205ENST00000449389 CD58P19256 250 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 GRIA2P42262 883 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 SLC6A11P48066 632 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 MXI1P50539 228 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 ELF2Q15723 593 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 PLK5Q496M5 336 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 HSF5Q4G112 596 aaPredicted RBP11.42□□□□□ -0.58
SRRT-205ENST00000449389 C2orf27AQ580R0 203 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 LY6G5CQ5SRR4 150 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 BTBD8Q5XKL5 378 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 C11orf74Q86VG3 221 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 CYFIP2Q96F07 1278 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 ARRDC1-AS1Q9H2J1 176 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.42□□□□□ -0.587e-30■■■■■ 195.6
SRRT-205ENST00000449389 ARHGEF4Q9NR80 690 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 SCML2Q9UQR0 700 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 PCDHA5Q9Y5H7 936 aa11.42□□□□□ -0.58
SRRT-205ENST00000449389 ATG2BQ96BY7 2078 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 A0A0A0MRY4 1105 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 HHLA1C9JL84 531 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 HOXC11O43248 304 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 ALDH1A2O94788 518 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 RHOBTB1O94844 696 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 ZNF806P0C7X5 589 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 IRF1P10914 325 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 ACO1P21399 889 aaKnown RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 TNFRSF4P43489 277 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 DGKEP52429 567 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 KDSRQ06136 332 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 GOLGA8FQ08AF8 430 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 GOLGA8DPQ0D2H9 430 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 PNOCQ13519 176 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 BECN1Q14457 450 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 CRY1Q16526 586 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 AASDHQ4L235 1098 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 USP39Q53GS9 565 aaKnown RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 GPRIN1Q7Z2K8 1008 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 RASSF3Q86WH2 238 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 C12orf40Q86WS4 652 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 BBS7Q8IWZ6 715 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 SMYD4Q8IYR2 804 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 CCDC33Q8N5R6 958 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 C12orf50Q8NA57 414 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 WHAMMQ8TF30 809 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 JAKMIP2Q96AA8 810 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 CNOT6LQ96LI5 555 aaKnown RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 TSG101Q99816 390 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 GTPBP4Q9BZE4 634 aaKnown RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 FAM124BQ9H5Z6 455 aaPredicted RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 CYLDQ9NQC7 956 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 SPHK2Q9NRA0 654 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 LSM7Q9UK45 103 aaKnown RBP11.41□□□□□ -0.58
SRRT-205ENST00000449389 SDK1Q7Z5N4 2213 aa11.41□□□□□ -0.58
SRRT-205ENST00000449389 SPAG17Q6Q759 2223 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 KIAA1549LQ6ZVL6 1849 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 DCDC2BA2VCK2 349 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 CYP26A1O43174 497 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 SMC2O95347 1197 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 KLF8O95600 359 aaPredicted RBP11.4□□□□□ -0.58
SRRT-205ENST00000449389 ATP5C1P36542 298 aaKnown RBP11.4□□□□□ -0.58
SRRT-205ENST00000449389 MPLP40238 635 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 PGFP49763 221 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 PSEN1P49768 467 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 KIF11P52732 1056 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 LIMK1P53667 647 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 NUCB2P80303 420 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 MESP2Q0VG99 397 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 COBLL1Q53SF7 1204 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 EOGTQ5NDL2 527 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 ZNF658Q5TYW1 1059 aaPredicted RBP11.4□□□□□ -0.58
SRRT-205ENST00000449389 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 KLHDC10Q6PID8 442 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 NUDT18Q6ZVK8 323 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 HTR3DQ70Z44 454 aa11.4□□□□□ -0.58
SRRT-205ENST00000449389 TADA2BQ86TJ2 420 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms