RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 LCP1P13796 627 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 CDH6P55285 790 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 SNX16P57768 344 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 BST2Q10589 180 aaKnown RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MORF4L2Q15014 288 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 PAN2Q504Q3 1202 aaKnown RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 FAM26DQ5JW98 314 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 NLRP14Q86W24 1093 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 C9orf72Q96LT7 481 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 CCT8L2Q96SF2 557 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 C10orf88Q9H8K7 445 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 A0A0U1RQF3 1178 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 TRAPPC3O43617 180 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 ZNF623O75123 536 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 ENDOD1O94919 500 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MYCP01106 439 aaPredicted RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 PECAM1P16284 738 aaPredicted RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MAP2K2P36507 400 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MAGEA4P43358 317 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 RABGGTBP53611 331 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 BCAT1P54687 386 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 GDF10P55107 478 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MBTPS1Q14703 1052 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 RNASEH2BQ5TBB1 312 aaKnown RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MYCBPAPQ8TBZ2 947 aa16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 HMX1Q9NP08 348 aaPredicted RBP16.81■□□□□ 0.28
AP000253.1-201ENST00000449339 MOXD2PA6NHM9 499 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 DPYSL4O14531 572 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 FAM107AO95990 144 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 PTPN1P18031 435 aaKnown RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SDC4P31431 198 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 MMRN1Q13201 1228 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 FUKQ8N0W3 1084 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 RSAD2Q8WXG1 361 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 NDRG1Q92597 394 aaKnown RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SELENOSQ9BQE4 189 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 MAK16Q9BXY0 300 aaKnown RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 NGRNQ9NPE2 291 aaKnown RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 DDX43Q9NXZ2 648 aaKnown RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 PTCH2Q9Y6C5 1203 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 GMNCA6NCL1 334 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 GABRDO14764 452 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 NDC80O14777 642 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 FKTNO75072 461 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 TCEA3O75764 348 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 BEST1O76090 585 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 TFE3P19532 575 aaPredicted RBP16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 GRK4P32298 578 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 MDH1BQ5I0G3 518 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SCYL2Q6P3W7 929 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 PAQR9Q6ZVX9 377 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 TAOK1Q7L7X3 1001 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SRLQ86TD4 932 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SPATA18Q8TC71 538 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SH3TC2Q8TF17 1288 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 HASPINQ8TF76 798 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 FAM172AQ8WUF8 416 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SAYSD1Q9NPB0 183 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 STARD7Q9NQZ5 370 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 SHOC2Q9UQ13 582 aa16.8■□□□□ 0.28
AP000253.1-201ENST00000449339 MCF2LO15068 1137 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 CHN1P15882 459 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 RAB27AP51159 221 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 EIF3EP60228 445 aaKnown RBP16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 DPYSL3Q14195 570 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 UPP1Q16831 310 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 CCDC38Q502W7 563 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 BOLA3Q53S33 107 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 ZNF473Q8WTR7 871 aaKnown RBP16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 FAM107BQ9H098 131 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 CRTAC1Q9NQ79 661 aa16.79■□□□□ 0.28
AP000253.1-201ENST00000449339 DESP17661 470 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 TIGD5Q53EQ6 642 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 PCGF5Q86SE9 256 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 MAP7D3Q8IWC1 876 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 SLAIN1Q8ND83 568 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 CENPTQ96BT3 561 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 CTNNAL1Q9UBT7 734 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 RRP15Q9Y3B9 282 aaKnown RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 F8W810 466 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 GNRH1P01148 92 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 RBP3P10745 1247 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 BRCC3P46736 316 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 CTCFP49711 727 aaPredicted RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 KRT81Q14533 505 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 ERMARDQ5T6L9 678 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 PIGZQ86VD9 579 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 ECHDC2Q86YB7 292 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 UNC45BQ8IWX7 931 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 ARHGEF2Q92974 986 aaKnown RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 HNRNPABQ99729 332 aaKnown RBP16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
AP000253.1-201ENST00000449339 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms