RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 GRIN2CQ14957 1233 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 TAF5Q15542 800 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 JOSD2Q8TAC2 188 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 PRDM12Q9H4Q4 367 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 PAXBP1Q9Y5B6 917 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 BUB1O43683 1085 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 DAB1O75553 588 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 LRG1P02750 347 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 RFC1P35251 1148 aaPredicted RBP14.74□□□□□ -0.05
SHMT2-203ENST00000449049 NOP2P46087 812 aaKnown RBP14.74□□□□□ -0.05
SHMT2-203ENST00000449049 TERF1P54274 439 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 PPM1LQ5SGD2 360 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 ELMSAN1Q6PJG2 1045 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 ITIH5Q86UX2 942 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 FNIP1Q8TF40 1166 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 ANAPC7Q9UJX3 599 aa14.74□□□□□ -0.05
SHMT2-203ENST00000449049 MOCS3O95396 460 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 PAPLNO95428 1278 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 POU2F2P09086 479 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 HNRNPA1P09651 372 aaKnown RBP eCLIP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 POU3F3P20264 500 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 MSNP26038 577 aaKnown RBP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 YWHAZP63104 245 aaKnown RBP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 IFI16Q16666 785 aaKnown RBP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF697Q5TEC3 545 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 TRNP1Q6NT89 227 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 DCUN1D2Q6PH85 259 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 HFE2Q6ZVN8 426 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 BEND5Q7L4P6 421 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 DNAJB7Q7Z6W7 309 aaPredicted RBP14.73□□□□□ -0.05
SHMT2-203ENST00000449049 MON1AQ86VX9 555 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 VN1R2Q8NFZ6 395 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 TPCN2Q8NHX9 752 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 OVCA2Q8WZ82 227 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 FBXO32Q969P5 355 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 SLC2A13Q96QE2 648 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 TRIM7Q9C029 511 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 ZDHHC7Q9NXF8 308 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 CAPN6Q9Y6Q1 641 aa14.73□□□□□ -0.05
SHMT2-203ENST00000449049 C2CD4BA6NLJ0 364 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 GRAP2O75791 330 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 LTFP02788 710 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 FYNP06241 537 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 ZDHHC11BP0C7U3 371 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 FLT3P36888 993 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 HYAL1Q12794 435 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 TAF10Q12962 218 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 TCEAL5Q5H9L2 206 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 SCD5Q86SK9 330 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 ARHGAP18Q8N392 663 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 EMC1Q8N766 993 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 FAM149B1Q96BN6 582 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 LRCH3Q96II8 777 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 TRIM62Q9BVG3 475 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 IRX2Q9BZI1 471 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 POPDC2Q9HBU9 364 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 GMIPQ9P107 970 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 LCMT1Q9UIC8 334 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 MAGED2Q9UNF1 606 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF638Q14966 1978 aaKnown RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 DPYSL4O14531 572 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 GTF2F1P35269 517 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 PGFP49763 221 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 NAP1L1P55209 391 aaKnown RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 RNASE9P60153 205 aaKnown RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 YWHAGP61981 247 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 OGDHQ02218 1023 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF252P-AS1Q0IIN9 211 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 BSPRYQ5W0U4 402 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 TMEM184AQ6ZMB5 413 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 PDZD8Q8NEN9 1154 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 GOLGA1Q92805 767 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 CASP10Q92851 521 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 BTBD6Q96KE9 485 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 SLITRK1Q96PX8 696 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 NMUR1Q9HB89 426 aa14.72□□□□□ -0.05
SHMT2-203ENST00000449049 UXTQ9UBK9 157 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-203ENST00000449049 A0A1W2PQH9 124 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 GRID2IPA4D2P6 1211 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 MYO1FO00160 1098 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 BUB1BO60566 1050 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 RFPL2O75678 378 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 GPD1P21695 349 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 MATKP42679 507 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 PSEN1P49768 467 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 TAF12Q16514 161 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 SNX30Q5VWJ9 437 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 C11orf63Q6NUN7 778 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 TMC8Q8IU68 726 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 DEFB106AQ8N104 65 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 ELMOD1Q8N336 334 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 EFHBQ8N7U6 833 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 LRRC57Q8N9N7 239 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 RXFP2Q8WXD0 754 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF512Q96ME7 567 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 DDX23Q9BUQ8 820 aaKnown RBP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 LRRC3Q9BY71 257 aa14.71□□□□□ -0.05
SHMT2-203ENST00000449049 ZNF334Q9HCZ1 680 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 TLR8Q9NR97 1041 aaKnown RBP14.71□□□□□ -0.05
SHMT2-203ENST00000449049 ABCC13Q9NSE7 274 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms