RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PUM1Q14671 1186 aaKnown RBP eCLIP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 E2F4Q16254 413 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PRSS55Q6UWB4 352 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 METTL16Q86W50 562 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 GRAMD1CQ8IYS0 662 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 GPATCH11Q8N954 259 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATAD1Q8NBU5 361 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 RBBP8NLQ8NC74 664 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATP2A3Q93084 1043 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SIPA1Q96FS4 1042 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SERPINB11Q96P15 392 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 EPB41L5Q9HCM4 733 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 FLRT1Q9NZU1 646 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 LCMT1Q9UIC8 334 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 RTTNQ86VV8 2226 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 E5RI56 91 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CACNB4O00305 520 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC31A1O15431 190 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 P4HA2O15460 535 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 LARGE1O95461 756 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MYOGP15173 224 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 KELP23276 732 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAT2AP31153 395 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PLA2G4AP47712 749 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PSMD8P48556 350 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TBX4P57082 545 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 IFFO1Q0D2I5 559 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAAP100Q0VG06 881 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 XRCC4Q13426 336 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCDC6Q16204 474 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 VARS2Q5ST30 1063 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 BPIFB1Q8TDL5 484 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CHTF18Q8WVB6 975 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 GDF3Q9NR23 364 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 IFNKQ9P0W0 207 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 RCOR1Q9UKL0 485 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SMIM28A0A1B0GU29 152 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZSCAN5CA6NGD5 496 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARL5CA6NH57 179 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TTLL8A6PVC2 850 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 AKR1B15C9JRZ8 316 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 VDRP11473 427 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 KRT20P35900 424 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PEX5P50542 639 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 JAG1P78504 1218 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 EVX2Q03828 476 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ITPRIPL2Q3MIP1 535 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PEX26Q7Z412 305 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CXorf40BQ96DE9 158 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CFAP97Q9P2B7 532 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 KLHL8Q9P2G9 620 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CYP8B1Q9UNU6 501 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 C2CD2Q9Y426 696 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PAPPAQ13219 1627 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP1R12AO14974 1030 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 C22orf31O95567 290 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM228AQ86W67 206 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 C2orf15Q8WU43 125 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP1R13BQ96KQ4 1090 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 NIFKQ9BYG3 293 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARRDC1-AS1Q9H2J1 176 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC13A4Q9UKG4 626 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 FGRP09769 529 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 PDGFRAP16234 1089 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 JADE1Q6IE81 842 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TYW1BQ6NUM6 668 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 KLHL35Q6PF15 583 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANKRD33Q7Z3H0 272 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SMYD4Q8IYR2 804 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MTMR8Q96EF0 704 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 C2orf49Q9BVC5 232 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAGEB5Q9BZ81 275 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TPSD1Q9BZJ3 242 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TSGA10Q9BZW7 698 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CHORDC1Q9UHD1 332 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MCF2LO15068 1137 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ADAMTS4O75173 837 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCNE2O96020 404 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 KLK3P07288 261 aaPredicted RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 MX2P20592 715 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CASRP41180 1078 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 TKTL1P51854 596 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF445P59923 1031 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 FRA10AC1Q70Z53 315 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 C12orf40Q86WS4 652 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 CELF5Q8N6W0 485 aaKnown RBP5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 DEPDC1BQ8WUY9 529 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 UBE2Q2Q8WVN8 375 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 GKN1Q9NS71 199 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SH3BGRL2Q9UJC5 107 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 SPACA6W5XKT8 324 aa5.86□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF318Q5VUA4 2279 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 EML1O00423 815 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 APBB3O95704 486 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 U2AF2P26368 475 aaKnown RBP eCLIP5.85□□□□□ -1.474e-6■■■□□ 16.3
CDC42BPA-209ENST00000448940 SLC11A1P49279 550 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 RHOAP61586 193 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms