RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 PXNP49023 591 aaPredicted RBP20.79■□□□□ 0.92
VCP-203ENST00000448530 GOLGA8FQ08AF8 430 aa20.79■□□□□ 0.92
VCP-203ENST00000448530 GOLGA8DPQ0D2H9 430 aa20.79■□□□□ 0.92
VCP-203ENST00000448530 ISM2Q6H9L7 571 aa20.79■□□□□ 0.92
VCP-203ENST00000448530 ELOA2Q8IYF1 753 aaPredicted RBP20.79■□□□□ 0.92
VCP-203ENST00000448530 WHAMMQ8TF30 809 aa20.79■□□□□ 0.92
VCP-203ENST00000448530 DHTKD1Q96HY7 919 aaPredicted RBP20.79■□□□□ 0.92
VCP-203ENST00000448530 TRIM49BA6NDI0 452 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 CCDC192P0DO97 292 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 IRF1P10914 325 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 ATP5C1P36542 298 aaKnown RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 PMS1P54277 932 aaKnown RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 SEC13P55735 322 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 SLC8A3P57103 927 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 PPP1R26Q5T8A7 1209 aaPredicted RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 BTBD8Q5XKL5 378 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 RHBDF2Q6PJF5 856 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 SYT13Q7L8C5 426 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 GPRIN1Q7Z2K8 1008 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 ZC3H3Q8IXZ2 948 aaKnown RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 TMEM176AQ96HP8 235 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 ZFRQ96KR1 1074 aaKnown RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 PNKPQ96T60 521 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 DUSP16Q9BY84 665 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 METTL14Q9HCE5 456 aaKnown RBP20.78■□□□□ 0.92
VCP-203ENST00000448530 KIAA1549LQ6ZVL6 1849 aa20.78■□□□□ 0.92
VCP-203ENST00000448530 MYOFQ9NZM1 2061 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 CYP26A1O43174 497 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 RPP40O75818 363 aaKnown RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 APODP05090 189 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 EIF2DP41214 584 aaKnown RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 YWHAEP62258 255 aaKnown RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 FOXK2Q01167 660 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 LMNB2Q03252 620 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 GAD2Q05329 585 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 DMC1Q14565 340 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 CBWD6Q4V339 395 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 C2orf27AQ580R0 203 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 CBWD3Q5JTY5 395 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 CBWD5Q5RIA9 395 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 TADA2BQ86TJ2 420 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 GAB3Q8WWW8 586 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 EZH1Q92800 747 aaPredicted RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 TATDN2Q93075 761 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 RMDN1Q96DB5 314 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 HHIPQ96QV1 700 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 LSM7Q9UK45 103 aaKnown RBP20.77■□□□□ 0.92
VCP-203ENST00000448530 MAN1B1Q9UKM7 699 aa20.77■□□□□ 0.92
VCP-203ENST00000448530 RALGAPA1Q6GYQ0 2036 aa20.77■□□□□ 0.91
VCP-203ENST00000448530 HHLA1C9JL84 531 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 APBB3O95704 486 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 SDHBP21912 280 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 HOXC13P31276 330 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 SPEM2Q0P670 501 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 GAB4Q2WGN9 574 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 CCDC40Q4G0X9 1142 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 PREPLQ4J6C6 727 aaPredicted RBP20.76■□□□□ 0.91
VCP-203ENST00000448530 LY6G5CQ5SRR4 150 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 KLHL10Q6JEL2 608 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 ERMP1Q7Z2K6 904 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 CEP63Q96MT8 703 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 ARID3AQ99856 593 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 CYLDQ9NQC7 956 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 ARHGEF4Q9NR80 690 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 POLR3BQ9NW08 1133 aaPredicted RBP20.76■□□□□ 0.91
VCP-203ENST00000448530 NAGPAQ9UK23 515 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 COQ4Q9Y3A0 265 aa20.76■□□□□ 0.91
VCP-203ENST00000448530 A0A1W2PQH9 124 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 PRR5-ARHGAP8B1AHC4 643 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 K7EQS6 105 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 AXIN1O15169 862 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 LRP3O75074 770 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 RARGP13631 454 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 SLC6A11P48066 632 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 PGFP49763 221 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 PSEN1P49768 467 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 KIF11P52732 1056 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 RAD23BP54727 409 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 ARHGAP8P85298 464 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 PUM1Q14671 1186 aaKnown RBP eCLIP20.75■□□□□ 0.916e-6■■■■□ 21
VCP-203ENST00000448530 C10orf120Q5SQS8 335 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 CACNA2D4Q7Z3S7 1137 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 BBS7Q8IWZ6 715 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 FAM160A2Q8N612 972 aaPredicted RBP20.75■□□□□ 0.91
VCP-203ENST00000448530 SLC4A11Q8NBS3 891 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 USP33Q8TEY7 942 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 SLC35C1Q96A29 364 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 DUSP9Q99956 384 aaKnown RBP20.75■□□□□ 0.91
VCP-203ENST00000448530 DNMT3LQ9UJW3 386 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 CIZ1Q9ULV3 898 aaPredicted RBP20.75■□□□□ 0.91
VCP-203ENST00000448530 DMXL1Q9Y485 3027 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 SPAG17Q6Q759 2223 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 CEP250Q9BV73 2442 aa20.75■□□□□ 0.91
VCP-203ENST00000448530 BICDL2A1A5D9 508 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 KAT7O95251 611 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 TBX18O95935 607 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 RALAP11233 206 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 MRPS21P82921 87 aaKnown RBP20.74■□□□□ 0.91
VCP-203ENST00000448530 KDSRQ06136 332 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms