RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 VTA1Q9NP79 307 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 DNAJC11Q9NVH1 559 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 FAM95CA0A1B0GW59 222 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 SSU72P8A0A1W2PR75 194 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 CALCAP01258 141 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 FCGR1AP12314 374 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 SERPINB9P50453 376 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ATP12AP54707 1039 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 NCF4Q15080 339 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.89
SMC6-207ENST00000448223 ZNF284Q2VY69 593 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ERICH5Q6P6B1 374 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 FAM149B1Q96BN6 582 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 RNFT2Q96EX2 444 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ZNF577Q9BSK1 485 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MED10Q9BTT4 135 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 NUP85Q9BW27 656 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 TTYH3Q9C0H2 523 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 RERGLQ9H628 205 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 IL1RL2Q9HB29 575 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ING3Q9NXR8 418 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 ADAM22Q9P0K1 906 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 H2AFY2Q9P0M6 372 aaPredicted RBP9.52□□□□□ -0.89
SMC6-207ENST00000448223 USP21Q9UK80 565 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.89
SMC6-207ENST00000448223 MYH6P13533 1939 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 KRT87PA6NCN2 255 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 MAGEA4P43358 317 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 DLG4P78352 724 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 CDK17Q00537 523 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ACAP2Q15057 778 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 SMU1Q2TAY7 513 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 SZRD1Q7Z422 152 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ZFPM1Q8IX07 1006 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 DRAXINQ8NBI3 349 aaPredicted RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 BAP1Q92560 729 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 TRPV5Q9NQA5 729 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PCMTD2Q9NV79 361 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 HSPBP1Q9NZL4 362 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 DPPA5A6NC42 116 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ENO2P09104 434 aaPredicted RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 ATP13A5Q4VNC0 1218 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 FIGNQ5HY92 759 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PROM2Q8N271 834 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 CAVIN3Q969G5 261 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 RTFDC1Q9BY42 306 aaPredicted RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 DDX4Q9NQI0 724 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 KCNQ5Q9NR82 932 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 EHD3Q9NZN3 535 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PFDN2Q9UHV9 154 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 SYNDIG1LA6NDD5 238 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 TTLL13PA6NNM8 815 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 TISP43B9A030 160 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 MAP3K13O43283 966 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PEX1O43933 1283 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 SNRPAP09012 282 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 CHRNB3Q05901 458 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 FAPQ12884 760 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 TYSND1Q2T9J0 566 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ZFP1Q6P2D0 407 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 LRRC55Q6ZSA7 311 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 FAM9CQ8IZT9 166 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 LRRC17Q8N6Y2 441 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 OR7A2PQ8NGA2 310 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 TRPC4APQ8TEL6 797 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ATXN2LQ8WWM7 1075 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 TADA1Q96BN2 335 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 EIF2AK1Q9BQI3 630 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 THAP2Q9H0W7 228 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PIGUQ9H490 435 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 KLHL11Q9NVR0 708 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 POLLQ9UGP5 575 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 GRID1Q9ULK0 1009 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 MED7O43513 233 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 NPTXRO95502 500 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PON1P27169 355 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 GSSP48637 474 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 QPRTQ15274 297 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ACCSLQ4AC99 568 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PDCD4Q53EL6 469 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 PRR5LQ6MZQ0 368 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 FAM180AQ6UWF9 173 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 ISLR2Q6UXK2 745 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 NECAB2Q7Z6G3 386 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 RHOT1Q8IXI2 618 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 RBM12BQ8IXT5 1001 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 EPS8L3Q8TE67 593 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 WDR12Q9GZL7 423 aaKnown RBP9.51□□□□□ -0.89
SMC6-207ENST00000448223 NUAK2Q9H093 628 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 BFARQ9NZS9 450 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 PCDHGB4Q9UN71 923 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 AKAP11Q9UKA4 1901 aa9.51□□□□□ -0.89
SMC6-207ENST00000448223 DCDC2CA8MYV0 355 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 C21orf2O43822 256 aa9.5□□□□□ -0.89
SMC6-207ENST00000448223 TOP3BO95985 862 aaKnown RBP9.5□□□□□ -0.89
SMC6-207ENST00000448223 RHAGQ02094 409 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms