RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CEP95Q96GE4 821 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 RBM17Q96I25 401 aaKnown RBP4.19□□□□□ -1.74
PMS1-216ENST00000447734 FAM227BQ96M60 508 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 ZSWIM3Q96MP5 696 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 WRNIP1Q96S55 665 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 MESP1Q9BRJ9 268 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 NDC1Q9BTX1 674 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 SLC46A2Q9BY10 475 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 EDEM3Q9BZQ6 932 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 MUC13Q9H3R2 512 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 RABEP2Q9H5N1 569 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 FSCN3Q9NQT6 498 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 TMLHEQ9NVH6 421 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 DNMT3BQ9UBC3 853 aaKnown RBP4.19□□□□□ -1.74
PMS1-216ENST00000447734 BAG5Q9UL15 447 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 NFU1Q9UMS0 254 aa4.19□□□□□ -1.74
PMS1-216ENST00000447734 SEPT4O43236 478 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 TAF5LO75529 589 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 LARGE1O95461 756 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 HMGCRP04035 888 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 C8BP07358 591 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 ALAS1P13196 640 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 ATP6V1B1P15313 513 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 NFKBIAP25963 317 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 ATP6V1E1P36543 226 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CASRP41180 1078 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 EIF2DP41214 584 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 MSH2P43246 934 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 MMP14P50281 582 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CDK7P50613 346 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 PPARDQ03181 441 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 DUSP8Q13202 625 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 SMAD4Q13485 552 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 CSHL1Q14406 222 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 EIF4HQ15056 248 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 TBCCQ15814 346 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 MFSD14BQ5SR56 506 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 UTP14CQ5TAP6 766 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 KRT40Q6A162 431 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CYP20A1Q6UW02 462 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 HSCBQ8IWL3 235 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 FAM71DQ8N9W8 422 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 FSIP1Q8NA03 581 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 AVL9Q8NBF6 648 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 SLC17A8Q8NDX2 589 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 TMIEQ8NEW7 156 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 OR5M3Q8NGP4 307 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 MGARPQ8TDB4 240 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 ABHD5Q8WTS1 349 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 SH3KBP1Q96B97 665 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 HIC2Q96JB3 615 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CLIC6Q96NY7 704 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 NOX5Q96PH1 765 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 EYA3Q99504 573 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 DESI2Q9BSY9 194 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 IMPG2Q9BZV3 1241 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 TTYH3Q9C0H2 523 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 KATNBL1Q9H079 304 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 RANBP17Q9H2T7 1088 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 RMI1Q9H9A7 625 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 IL21RQ9HBE5 538 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 BARX1Q9HBU1 254 aaPredicted RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 SPON1Q9HCB6 807 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 LIN7CQ9NUP9 197 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 FBXO34Q9NWN3 711 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 HCFC1R1Q9NWW0 138 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 HESX1Q9UBX0 185 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CROTQ9UKG9 612 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 FAM184BQ9ULE4 1060 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 SHOC2Q9UQ13 582 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 CLCA2Q9UQC9 943 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 GDAQ9Y2T3 454 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 PCDHGB5Q9Y5G0 923 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 RBM8AQ9Y5S9 174 aaKnown RBP4.18□□□□□ -1.74
PMS1-216ENST00000447734 CDY1Q9Y6F8 540 aa4.18□□□□□ -1.74
PMS1-216ENST00000447734 ZMYM3Q14202 1370 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 C17orf113A0A1B0GUU1 675 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 DBX1A6NMT0 343 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 CXorf49A8MYA2 514 aaPredicted RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 UBE2CO00762 179 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SRGAP2O75044 1071 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TOX4O94842 621 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 AGFG2O95081 481 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TGDSO95455 350 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 AMHP03971 560 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TUBB4AP04350 444 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SPARCP09486 303 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SNRPA1P09661 255 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 CYP2C8P10632 490 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 SCG2P13521 617 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TM4SF1P30408 202 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 PSMB10P40306 273 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 MEOX1P50221 254 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 PTTG1IPP53801 180 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 RAP2BP61225 183 aa4.17□□□□□ -1.74
PMS1-216ENST00000447734 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 PUM1Q14671 1186 aaKnown RBP eCLIP4.17□□□□□ -1.74
PMS1-216ENST00000447734 SMC1AQ14683 1233 aaKnown RBP4.17□□□□□ -1.74
PMS1-216ENST00000447734 IQCB1Q15051 598 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms