RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 RFWD3Q6PCD5 774 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 RAB44Q7Z6P3 723 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 PHF13Q86YI8 300 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 UNC45BQ8IWX7 931 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 DAW1Q8N136 415 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ASAP3Q8TDY4 903 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 OPTNQ96CV9 577 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 SGF29Q96ES7 293 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 GCNAQ96QF7 691 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 CADM1Q9BY67 442 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 DDX18Q9NVP1 670 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 NDUFA13Q9P0J0 144 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 PACSIN3Q9UKS6 424 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ATP8B3O60423 1300 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ASTN2O75129 1339 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ETS2P15036 469 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 RAG1P15918 1043 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 TMEM132DQ14C87 1099 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 Q3C1V9 767 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 NIPA1Q7RTP0 329 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ARHGAP22Q7Z5H3 698 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 POLNQ7Z5Q5 900 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 FAM228AQ86W67 206 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 CLPTM1LQ96KA5 538 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ILKAPQ9H0C8 392 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 DCDC2Q9UHG0 476 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 FNDC3AQ9Y2H6 1198 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 SDR42E2A6NKP2 422 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 CPA3P15088 417 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 GOLGA7BQ2TAP0 167 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 UBAP2Q5T6F2 1119 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 WDR49Q8IV35 697 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 EFCAB3Q8N7B9 438 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 LRRN4Q8WUT4 740 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 THAP11Q96EK4 314 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 CEP41Q9BYV8 373 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 FAM192AQ9GZU8 254 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 ZCWPW1Q9H0M4 648 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 MRPL40Q9NQ50 206 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 IPO11Q9UI26 975 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 AKAP10O43572 662 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 PEX11AO75192 247 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 SMNDC1O75940 238 aaKnown RBP eCLIP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 USP1O94782 785 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 SP100P23497 879 aaPredicted RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 MRPS9P82933 396 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 IER5Q5VY09 327 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 C16orf87Q6PH81 154 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 TTC39CQ8N584 583 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 JADE3Q92613 823 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 MFSD14AQ96MC6 490 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 WARS2Q9UGM6 360 aaKnown RBP11.62□□□□□ -0.55
ZNF550-204ENST00000447310 POLIQ9UNA4 740 aa11.62□□□□□ -0.55
ZNF550-204ENST00000447310 TMEM191CA6NGB0 347 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 SLC4A1P02730 911 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 EIF4BP23588 611 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 GRK2P25098 689 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 NCKAP1LP55160 1127 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 UBAP2LQ14157 1087 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 DENND1BQ6P3S1 775 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 CXorf38Q8TB03 319 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 MMADHCQ9H3L0 296 aaPredicted RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 CLIC5Q9NZA1 410 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 MYH7P12883 1935 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 GNGT2O14610 69 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 ZMPSTE24O75844 475 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 PGM3O95394 542 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 THRAP10827 490 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 SOX11P35716 441 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 GLRBP48167 497 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 MMRN1Q13201 1228 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 GRAMD4Q6IC98 578 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 BBS12Q6ZW61 710 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 CCDC60Q8IWA6 550 aaPredicted RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 ZC3H3Q8IXZ2 948 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 ULK2Q8IYT8 1036 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 USP13Q92995 863 aaPredicted RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 MPP4Q96JB8 637 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 FSD1LQ9BXM9 530 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 SIK2Q9H0K1 926 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 RGPD5Q99666 1765 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 PRR5-ARHGAP8B1AHC4 643 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 HUS1O60921 280 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 SULT1E1P49888 294 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 ARHGAP8P85298 464 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 PDK2Q15119 407 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 TEDDM1Q5T9Z0 273 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 TATDN1Q6P1N9 297 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 CES3Q6UWW8 571 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 TTC7BQ86TV6 843 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 RBM15BQ8NDT2 890 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 GSTCDQ8NEC7 633 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 BEST2Q8NFU1 509 aa11.61□□□□□ -0.55
ZNF550-204ENST00000447310 PIWIL2Q8TC59 973 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 TFB1MQ8WVM0 346 aaKnown RBP11.61□□□□□ -0.55
ZNF550-204ENST00000447310 PHACTR1Q9C0D0 580 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms