RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 PSMD2Q13200 908 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 UBE2SQ16763 222 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ZKSCAN2Q63HK3 967 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 TPGS2Q68CL5 300 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 FBXL19Q6PCT2 694 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 SRGAP1Q7Z6B7 1085 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ZAR1Q86SH2 424 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 ITPRIPQ8IWB1 547 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 DHX40Q8IX18 779 aaKnown RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 TRIML1Q8N9V2 468 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 EXOC4Q96A65 974 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 CCDC51Q96ER9 411 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 HSPA12BQ96MM6 686 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 NLRP4Q96MN2 994 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 DPH1Q9BZG8 443 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 DNAJC25Q9H1X3 360 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 PSTPIP2Q9H939 334 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 GPRC5CQ9NQ84 441 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 NRBP2Q9NSY0 501 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 SUCLA2Q9P2R7 463 aaPredicted RBP3.6□□□□□ -1.83
PMS1-215ENST00000447232 CCDC39Q9UFE4 941 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 BRPF3Q9ULD4 1205 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.6□□□□□ -1.83
PMS1-215ENST00000447232 MED13Q9UHV7 2174 aa3.6□□□□□ -1.83
PMS1-215ENST00000447232 IGHV1OR15-9A0A0B4J2B8 117 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 PTGESO14684 152 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 ZNF213O14771 459 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 STBD1O95210 358 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 B3GALT4O96024 378 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 CDK4P11802 303 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 AKAP5P24588 427 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 MATKP42679 507 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 TXKP42681 527 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 DNM2P50570 870 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 ORC1Q13415 861 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 HLA-BQ31612 363 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 IFIT1BQ5T764 474 aaKnown RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 HES3Q5TGS1 186 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 CCDC33Q8N5R6 958 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 RIN3Q8TB24 985 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 NAF1Q96HR8 494 aaKnown RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 ZNF578Q96N58 590 aaPredicted RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 SEMA6CQ9H3T2 930 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 TASP1Q9H6P5 420 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 NFE2L3Q9Y4A8 694 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 DENND4CQ5VZ89 1909 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 IGLV3-22A0A075B6J6 115 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 A0A1B0GTW7 788 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 SGK1O00141 431 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 CYP26A1O43174 497 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 KLK10O43240 276 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 SMARCA5O60264 1052 aaPredicted RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 TSPAN1O60635 241 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 HMMRO75330 724 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 PRNPP04156 253 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 C1SP09871 688 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 GNSP15586 552 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 SMARCA1P28370 1054 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 AXLP30530 894 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 GRK6P43250 576 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 MRPS21P82921 87 aaKnown RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 MRPL58Q14197 206 aaKnown RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 PCBP1Q15365 356 aaKnown RBP eCLIP3.59□□□□□ -1.83
PMS1-215ENST00000447232 UGCGQ16739 394 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 HSF5Q4G112 596 aaPredicted RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 CCDC157Q569K6 752 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 GPR158Q5T848 1215 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 NOTUMQ6P988 496 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 IL27RAQ6UWB1 636 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 TTC30AQ86WT1 665 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 IL17RCQ8NAC3 791 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 BEST2Q8NFU1 509 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 HMGB4Q8WW32 186 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 KCNE4Q8WWG9 221 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 DNASE2BQ8WZ79 361 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 FAM129BQ96TA1 746 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 SPZ1Q9BXG8 430 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 KRTAP4-5Q9BYR2 181 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 EPN3Q9H201 632 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 GSX1Q9H4S2 264 aaPredicted RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 ECT2Q9H8V3 914 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 AFF4Q9UHB7 1163 aaKnown RBP3.59□□□□□ -1.83
PMS1-215ENST00000447232 YIPF1Q9Y548 306 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 TMEM131Q92545 1883 aa3.59□□□□□ -1.83
PMS1-215ENST00000447232 PHLPP2Q6ZVD8 1323 aa3.59□□□□□ -1.84
PMS1-215ENST00000447232 FAM86B1E9PN63 330 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 PCDHGA12O60330 932 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 VNN2O95498 520 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 NEFLP07196 543 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 FAM86B2P0C5J1 330 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 PDGFRLQ15198 375 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 IGFBP7Q16270 282 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 SEZ6L2Q6UXD5 910 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 DYMQ7RTS9 669 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 HACE1Q8IYU2 909 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 ALLCQ8N6M5 410 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 TXNDC5Q8NBS9 432 aaKnown RBP3.58□□□□□ -1.84
PMS1-215ENST00000447232 PI4K2BQ8TCG2 481 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 PIBF1Q8WXW3 757 aa3.58□□□□□ -1.84
PMS1-215ENST00000447232 RFFLQ8WZ73 363 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms