RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 KCTD17Q8N5Z5 321 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 C10orf82Q8WW14 230 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 RAD54LQ92698 747 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 SNX27Q96L92 541 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 CGREF1Q99674 301 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 GPAMQ9HCL2 828 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 UBN1Q9NPG3 1134 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 INIPQ9NRY2 104 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 ZNHIT2Q9UHR6 403 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 PADI3Q9ULW8 664 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 FADS3Q9Y5Q0 445 aa13.65□□□□□ -0.22
DDX56-206ENST00000446987 M0QZ92 97 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
DDX56-206ENST00000446987 GSC2O15499 205 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 CDK4P11802 303 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 BRAFP15056 766 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 FGFR4P22455 802 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 PTGIRP43119 386 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 WDR5P61964 334 aaKnown RBP13.64□□□□□ -0.23
DDX56-206ENST00000446987 FAM91A1Q658Y4 838 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
DDX56-206ENST00000446987 ZNF410Q86VK4 478 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 ART4Q93070 314 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 NLRP4Q96MN2 994 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 ARPC5LQ9BPX5 153 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 SIKE1Q9BRV8 207 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 TRIM9Q9C026 710 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 SEMA6BQ9H3T3 888 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 AMFRQ9UKV5 643 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 EFR3BQ9Y2G0 817 aa13.64□□□□□ -0.23
DDX56-206ENST00000446987 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 SMIM23A6NLE4 172 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MATN2O00339 956 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MAGEC1O60732 1142 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 FGGP02679 453 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 GTF2H1P32780 548 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 PRKCIP41743 596 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 CTC1Q2NKJ3 1217 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 SYCP2LQ5T4T6 812 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 TMEM53Q6P2H8 277 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 DSTYKQ6XUX3 929 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX56-206ENST00000446987 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 EXOC8Q8IYI6 725 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MCPH1Q8NEM0 835 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 DEPTORQ8TB45 409 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 VPS50Q96JG6 964 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 DHRS1Q96LJ7 313 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 FNBP1Q96RU3 617 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MIPEPQ99797 713 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 CYLDQ9NQC7 956 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 ZFP69BQ9UJL9 534 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 PCDHA3Q9Y5H8 950 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 ARHGAP10A1A4S6 786 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 P4HA2O15460 535 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 GAS8O95995 478 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 EDN1P05305 212 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 ASPHQ12797 758 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 STK4Q13043 487 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 DSC3Q14574 896 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MFSD4BQ5TF39 518 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 LRRC55Q6ZSA7 311 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 RNF149Q8NC42 400 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 MGARPQ8TDB4 240 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 SEPT8Q92599 483 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 LARP4BQ92615 738 aaKnown RBP13.63□□□□□ -0.23
DDX56-206ENST00000446987 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 PACSIN1Q9BY11 444 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 KCNK9Q9NPC2 374 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 STK17AQ9UEE5 414 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 ADAMTS1Q9UHI8 967 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 PHTF1Q9UMS5 762 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 ST3GAL5Q9UNP4 418 aa13.63□□□□□ -0.23
DDX56-206ENST00000446987 GRXCR1A8MXD5 290 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 DNAJC6O75061 913 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 ETS2P15036 469 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 KRT72Q14CN4 511 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 AMHR2Q16671 573 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 HABP4Q5JVS0 413 aaKnown RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 FAM102BQ5T8I3 360 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 THOC7Q6I9Y2 204 aaKnown RBP13.62□□□□□ -0.23
DDX56-206ENST00000446987 RFWD3Q6PCD5 774 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 C1orf228Q6PIY5 440 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 IZUMO2Q6UXV1 221 aa13.62□□□□□ -0.23
DDX56-206ENST00000446987 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms