RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 CLEC4FQ8N1N0 589 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 GAS2L1Q99501 681 aaPredicted RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 CGRRF1Q99675 332 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SAE1Q9UBE0 346 aaPredicted RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 STARD13Q9Y3M8 1113 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 A0A1B0GTH6 734 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 RBP3P10745 1247 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ALG11Q2TAA5 492 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ABCB6Q9NP58 842 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 RPS6KB2Q9UBS0 482 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ERN1O75460 977 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 FKBP9O95302 570 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 IGSF6O95976 241 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SERPINF2P08697 491 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 PTK7Q13308 1070 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SLC27A1Q6PCB7 646 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 FAM47EQ6ZV65 393 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 FKBP9P1Q75LS8 142 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 OMDQ99983 421 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 F8W810 466 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 CST8O60676 142 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 GUCY1B2O75343 617 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 CENPAP49450 140 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 DEFB132Q7Z7B7 95 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 USP33Q8TEY7 942 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 FBXO10Q9UK96 956 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SETD1AO15047 1707 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 GNA13Q14344 377 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 USP45Q70EL2 814 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 OLFM3Q96PB7 478 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 ASB7Q9H672 318 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 MIEF1Q9NQG6 463 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SPG21Q9NZD8 308 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 MTO1Q9Y2Z2 717 aaKnown RBP12.1□□□□□ -0.47
FN1-212ENST00000446046 CTSEP14091 401 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 YWHAQP27348 245 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 RRM2P31350 389 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 RXRGP48443 463 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 HIPK4Q8NE63 616 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 OSGEPL1Q9H4B0 414 aa12.1□□□□□ -0.47
FN1-212ENST00000446046 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 AMHR2Q16671 573 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 CPB2Q96IY4 423 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 LRRC40Q9H9A6 602 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 IMPAD1Q9NX62 359 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 TM9SF1O15321 606 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 THOP1P52888 689 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 RHOAP61586 193 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 TCEA2Q15560 299 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 PKN2Q16513 984 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 GLRA4Q5JXX5 417 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 RASGRP2Q7LDG7 609 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ACOT1Q86TX2 421 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 MIB1Q86YT6 1006 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 STARD8Q92502 1023 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 CASP10Q92851 521 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ACSF2Q96CM8 615 aaPredicted RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 TMEM253P0C7T8 217 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ARMC2Q8NEN0 867 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 RANBP17Q9H2T7 1088 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 POLD4Q9HCU8 107 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ADGRG1Q9Y653 693 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 MAP3K7CLP57077 242 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 TBX4P57082 545 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 FNDC3BQ53EP0 1204 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 HIBCHQ6NVY1 386 aaPredicted RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 ANKMY2Q8IV38 441 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 SH2D3AQ9BRG2 576 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 AMACRQ9UHK6 382 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 CHMP2BQ9UQN3 213 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 WNT10BO00744 389 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 DNAJB2P25686 324 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 SMARCB1Q12824 385 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 C10orf53Q8N6V4 93 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 GFM2Q969S9 779 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 MRIQ9BWK5 157 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 SCN3BQ9NY72 215 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 MAPRE3Q9UPY8 281 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ZNF510Q9Y2H8 683 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 ADAMTS13Q76LX8 1427 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 SLC12A8A0AV02 714 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 GLP2RO95838 553 aa12.09□□□□□ -0.47
FN1-212ENST00000446046 EIF2S1P05198 315 aaKnown RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 ALDH5A1P51649 535 aaPredicted RBP12.09□□□□□ -0.47
FN1-212ENST00000446046 DAB2P98082 770 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms