RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 TOGARAM2Q6ZUX3 1019 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 FAM183BPQ6ZVS7 135 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 PDZD4Q76G19 769 aaPredicted RBP16.57■□□□□ 0.24
USP40-206ENST00000443711 NDRG1Q92597 394 aaKnown RBP16.57■□□□□ 0.24
USP40-206ENST00000443711 GOLGA1Q92805 767 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 MCRS1Q96EZ8 462 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 RIPOR3Q96MK2 946 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 IL21Q9HBE4 155 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 AVENQ9NQS1 362 aaPredicted RBP16.57■□□□□ 0.24
USP40-206ENST00000443711 GMIPQ9P107 970 aa16.57■□□□□ 0.24
USP40-206ENST00000443711 ANKRD62A6NC57 917 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 GOLGA8SH3BPF8 625 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 ZNF263O14978 683 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 GLI1P08151 1106 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 ZDHHC11BP0C7U3 371 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 MTHFRP42898 656 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 GALCP54803 685 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 GSCP56915 257 aaPredicted RBP16.56■□□□□ 0.24
USP40-206ENST00000443711 YWHAGP61981 247 aaKnown RBP eCLIP16.56■□□□□ 0.24
USP40-206ENST00000443711 GPC5P78333 572 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 KRT83P78385 493 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 NTHL1P78549 312 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 CCZ1BP86790 482 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 CCZ1P86791 482 aaPredicted RBP16.56■□□□□ 0.24
USP40-206ENST00000443711 OLFML1Q6UWY5 402 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 DNAAF5Q86Y56 855 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 CLEC4CQ8WTT0 213 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 HLA-CQ95604 372 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 ZNF653Q96CK0 615 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 TRIM62Q9BVG3 475 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 ASNSD1Q9NWL6 643 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 INTUQ9ULD6 942 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 COG5Q9UP83 839 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 ANAPC1Q9H1A4 1944 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 OBSL1O75147 1896 aa16.56■□□□□ 0.24
USP40-206ENST00000443711 A0A1W2PQH9 124 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 YJEFN3A6XGL0 299 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 E7ENQ6 273 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 ABL1P00519 1130 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 LTFP02788 710 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 ABCB4P21439 1286 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 KCNA5P22460 613 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 RRM1P23921 792 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 YWHAZP63104 245 aaKnown RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 CLUL1Q15846 466 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 ARHGAP15Q53QZ3 475 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 FAM102AQ5T9C2 384 aaPredicted RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 BSPRYQ5W0U4 402 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 BTBD8Q5XKL5 378 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 GAREM2Q75VX8 874 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 SLC26A9Q7LBE3 791 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 BHLHA9Q7RTU4 235 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 SCD5Q86SK9 330 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 PHLDB2Q86SQ0 1253 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 TMEM150AQ86TG1 271 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 SMRP1Q8NCR6 262 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 C3orf20Q8ND61 904 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 MAFAQ8NHW3 353 aaPredicted RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 FEZF2Q8TBJ5 459 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 CTNNBL1Q8WYA6 563 aaPredicted RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 FAM149B1Q96BN6 582 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 SELENOOQ9BVL4 669 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 ATXN3LQ9H3M9 355 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 WDR6Q9NNW5 1121 aaKnown RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 PARVAQ9NVD7 372 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 CLIC5Q9NZA1 410 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 CNOT8Q9UFF9 292 aaKnown RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 MRPS23Q9Y3D9 190 aaKnown RBP16.55■□□□□ 0.24
USP40-206ENST00000443711 PCDHA13Q9Y5I0 950 aa16.55■□□□□ 0.24
USP40-206ENST00000443711 A0A1W2PRU2 124 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 H3BQ06 376 aaPredicted RBP16.54■□□□□ 0.24
USP40-206ENST00000443711 HSF2BPO75031 334 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 TMEM253P0C7T8 217 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 RALAP11233 206 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 FSHRP23945 695 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 PRSS36Q5K4E3 855 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 PLEKHA7Q6IQ23 1121 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 TXLNBQ8N3L3 684 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 SHKBP1Q8TBC3 707 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 NECTIN4Q96NY8 510 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 THAP2Q9H0W7 228 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 NMUR1Q9HB89 426 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 MRPL47Q9HD33 250 aaKnown RBP16.54■□□□□ 0.24
USP40-206ENST00000443711 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 MYO1AQ9UBC5 1043 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 SCINQ9Y6U3 715 aa16.54■□□□□ 0.24
USP40-206ENST00000443711 CLUHO75153 1309 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 TCRBV5S1A1TA0A578 114 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 SIGLEC16A6NMB1 481 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 SOBPA7XYQ1 873 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 CYP1A2P05177 515 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 KRT3P12035 628 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 CCR2P41597 374 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 RNASE9P60153 205 aaKnown RBP16.53■□□□□ 0.24
USP40-206ENST00000443711 TAF5Q15542 800 aa16.53■□□□□ 0.24
USP40-206ENST00000443711 SLC5A9Q2M3M2 681 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms