RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 LSM7Q9UK45 103 aaKnown RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
TTC28-203ENST00000442232 MMP17Q9ULZ9 603 aa12.46□□□□□ -0.41
TTC28-203ENST00000442232 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 NUP205Q92621 2012 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 K7EQS6 105 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 TNFRSF10BO14763 440 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 GDF9O60383 454 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 STX10O60499 249 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 TLR5O60602 858 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 TIE1P35590 1138 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 ASPAP45381 313 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 GCLMP48507 274 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 CREB5Q02930 508 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 ENPEPQ07075 957 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 CCDC6Q16204 474 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 NFIL3Q16649 462 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 ANO4Q32M45 955 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 EOGTQ5NDL2 527 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 LY6G5CQ5SRR4 150 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 SNX30Q5VWJ9 437 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 SPOPLQ6IQ16 392 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 TRMT11Q7Z4G4 463 aaKnown RBP12.45□□□□□ -0.42
TTC28-203ENST00000442232 CRYBG2Q8N1P7 616 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 CCDC33Q8N5R6 958 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 EZH1Q92800 747 aaPredicted RBP12.45□□□□□ -0.42
TTC28-203ENST00000442232 NT5C1AQ9BXI3 368 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 NIF3L1Q9GZT8 377 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 DUSP15Q9H1R2 295 aaPredicted RBP12.45□□□□□ -0.42
TTC28-203ENST00000442232 CYP3A43Q9HB55 503 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.45□□□□□ -0.42
TTC28-203ENST00000442232 HMGXB4Q9UGU5 601 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 MAPK8IP1Q9UQF2 711 aa12.45□□□□□ -0.42
TTC28-203ENST00000442232 A0A1W2PQ27 194 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 A0A1W2PQ64 194 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 A0A1W2PQD8 194 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TBC1D3BA6NDS4 549 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 KLF8O95600 359 aaPredicted RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 TRIM49P0CI25 452 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TRIM49CP0CI26 452 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 EPB41P11171 864 aaKnown RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 CD58P19256 250 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TNFRSF4P43489 277 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 LIMK1P53667 647 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 INCA1Q0VD86 236 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 DPYDQ12882 1025 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 ADAM9Q13443 819 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 BYSLQ13895 437 aaKnown RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 RHBDF2Q6PJF5 856 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 PAQR9Q6ZVX9 377 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TADA2BQ86TJ2 420 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 GUF1Q8N442 669 aaKnown RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 TTC39CQ8N584 583 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 ALLCQ8N6M5 410 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TXNDC5Q8NBS9 432 aaKnown RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 CNOT6LQ96LI5 555 aaKnown RBP12.44□□□□□ -0.42
TTC28-203ENST00000442232 SMOQ99835 787 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 TMEM8AQ9HCN3 771 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 CSNK1G1Q9HCP0 422 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 RMND1Q9NWS8 449 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 IL37Q9NZH6 218 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 DEC1Q9P2X7 70 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 PCDHA5Q9Y5H7 936 aa12.44□□□□□ -0.42
TTC28-203ENST00000442232 FAM237AA0A1B0GTK4 181 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 FAM92AA1XBS5 289 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 GOLGA6L4A6NEF3 574 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 DCLK1O15075 740 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 HOXC11O43248 304 aaPredicted RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 MAP3K13O43283 966 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ZNF202O95125 648 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 CAVIN2O95810 425 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ZDHHC11BP0C7U3 371 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ACO1P21399 889 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 SLC6A11P48066 632 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 MXI1P50539 228 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 CRY1Q16526 586 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 GAB4Q2WGN9 574 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 PLA2G2CQ5R387 149 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 KRT39Q6A163 491 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 CYP2U1Q7Z449 544 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 C12orf40Q86WS4 652 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 BBS7Q8IWZ6 715 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 PGBD3Q8N328 593 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 C12orf29Q8N999 325 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ZMIZ2Q8NF64 920 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 TAS1R2Q8TE23 839 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 CYFIP2Q96F07 1278 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 ZFRQ96KR1 1074 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 XPO6Q96QU8 1125 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 CDK5RAP1Q96SZ6 601 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 HNRNPABQ99729 332 aaKnown RBP12.43□□□□□ -0.42
TTC28-203ENST00000442232 TSG101Q99816 390 aa12.43□□□□□ -0.42
TTC28-203ENST00000442232 DUSP9Q99956 384 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms