RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RPS6KC1Q96S38 1066 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 HSD17B14Q9BPX1 270 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 KXD1Q9BQD3 176 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 EIF2AK1Q9BQI3 630 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 POLR3CQ9BUI4 534 aaPredicted RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 SMOC1Q9H4F8 434 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 BRD9Q9H8M2 597 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CARS2Q9HA77 564 aaKnown RBP5.22□□□□□ -1.57
PTPN4-206ENST00000441089 RGL1Q9NZL6 768 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 LRWD1Q9UFC0 647 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 PCOLCE2Q9UKZ9 415 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 NAV3Q8IVL0 2385 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 CACNA1DQ01668 2161 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 NFASCO94856 1347 aa5.22□□□□□ -1.57
PTPN4-206ENST00000441089 TDRD15B5MCY1 1934 aaKnown RBP5.21□□□□□ -1.57
PTPN4-206ENST00000441089 A0A087WV48 116 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 A0A0U1RQF3 1178 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 GSTTP1A0A1W2PQM5 241 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 BCLAF3A2AJT9 711 aaKnown RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 ENO4A6NNW6 628 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 UPK3BL1B0FP48 263 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 UPK3BL2E5RIL1 263 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 E9PMD0 336 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 TEX28O15482 410 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 MAFGO15525 162 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 KLRC4O43908 158 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RHOBTB1O94844 696 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 SLITRK3O94933 977 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 STBD1O95210 358 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 SOD2P04179 222 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 SSBP05455 408 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 HNRNPA1P09651 372 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CHRNB1P11230 501 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 BMP6P22004 513 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RPA1P27694 616 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CCT6AP40227 531 aaKnown RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 UBA7P41226 1012 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 STAT6P42226 847 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 AFMP43652 599 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 ABCG1P45844 678 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CRYBB1P53674 252 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 MLLT6P55198 1093 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CREB5Q02930 508 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 PNOCQ13519 176 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 HNRNPDQ14103 355 aaKnown RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 POSTNQ15063 836 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 EPHA7Q15375 998 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 UAP1L1Q3KQV9 507 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 DGKKQ5KSL6 1271 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RRAGBQ5VZM2 374 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 KRT79Q5XKE5 535 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 PDXDC1Q6P996 788 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 GLB1LQ6UWU2 654 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 FAM228AQ86W67 206 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 ELOA2Q8IYF1 753 aaPredicted RBP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 SPATA18Q8TC71 538 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 ASB11Q8WXH4 323 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RAD54LQ92698 747 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CDHR1Q96JP9 859 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 PCYT2Q99447 389 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 ANP32EQ9BTT0 268 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RAB34Q9BZG1 259 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 BLZF1Q9H2G9 400 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 TNMDQ9H2S6 317 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 AZI2Q9H6S1 392 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 C12orf49Q9H741 205 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 CBX8Q9HC52 389 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 TRPV5Q9NQA5 729 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPN4-206ENST00000441089 TBC1D22BQ9NU19 505 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 KBTBD4Q9NVX7 518 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 FAM8A1Q9UBU6 413 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 RELNP78509 3460 aa5.21□□□□□ -1.58
PTPN4-206ENST00000441089 COL4A2P08572 1712 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 IGKV6D-21A0A0A0MT36 114 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SPAARA0A1B0GVQ0 90 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 TMEM150BA6NC51 233 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 MYMKA6NI61 221 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CDX4O14627 284 aaPredicted RBP5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SLC26A4O43511 780 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 KRT38O76015 456 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 LYPLA2O95372 231 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ALDH2P05091 517 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 PLA2G4BP0C869 781 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CYP11B2P19099 503 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 GLUD2P49448 558 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SLC26A2P50443 739 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 JAK3P52333 1124 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 SLC12A3P55017 1021 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ACTR2P61160 394 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CREMQ03060 361 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CFHR1Q03591 330 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 LMAN2Q12907 356 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 CUL4BQ13620 913 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 PLCB4Q15147 1175 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 PLK5Q496M5 336 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 ARSHQ5FYA8 562 aa5.2□□□□□ -1.58
PTPN4-206ENST00000441089 NT5DC1Q5TFE4 455 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms