RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 TRIM16O95361 564 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 OLFM2O95897 454 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ADH1CP00326 375 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 EGFP01133 1207 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ATICP31939 592 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 RDXP35241 583 aaKnown RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ACOT2P49753 483 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TUBP50607 506 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 GUCY2FP51841 1108 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 AMPD3Q01432 767 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 SPAG1Q07617 926 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 KCNB1Q14721 858 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 N4BP2L1Q5TBK1 243 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 RRAGBQ5VZM2 374 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 RESP18Q5W5W9 173 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 SLC36A4Q6YBV0 504 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 C11orf57Q6ZUT1 292 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TADA2BQ86TJ2 420 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 WDR49Q8IV35 697 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 CCDC65Q8IXS2 484 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 EFCAB13Q8IY85 973 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ADGRF2Q8IZF7 708 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 GPD1LQ8N335 351 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TSTD1Q8NFU3 115 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 USP33Q8TEY7 942 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 DNAI2Q9GZS0 605 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 MRPL44Q9H9J2 332 aaKnown RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TMEM9BQ9NQ34 198 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ANO10Q9NW15 660 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 RBAKQ9NYW8 714 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 VPS18Q9P253 973 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 L1RE1Q9UN81 338 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 AGAP1Q9UPQ3 857 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TMEM191BP0C7N4 346 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 FAM200BP0CF97 657 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 PFKFB1P16118 471 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 NMT1P30419 496 aaKnown RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ADSSP30520 456 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 POLR2BP30876 1174 aaKnown RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 STX1AQ16623 288 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 DUOXA2Q1HG44 320 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 SNX30Q5VWJ9 437 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 HEATR6Q6AI08 1181 aaKnown RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 SFR1Q86XK3 245 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ELOA2Q8IYF1 753 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 STKLD1Q8NE28 680 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 GIPC2Q8TF65 315 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 TMEM174Q8WUU8 243 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 ELOVL4Q9GZR5 314 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 EBF3Q9H4W6 596 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 SLC32A1Q9H598 525 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 POLMQ9NP87 494 aaPredicted RBP6.38□□□□□ -1.39
PTPRR-204ENST00000440835 INTS13Q9NVM9 706 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 DNAI1Q9UI46 699 aa6.38□□□□□ -1.39
PTPRR-204ENST00000440835 NUP205Q92621 2012 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 FAM237AA0A1B0GTK4 181 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 E2F8A0AVK6 867 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ZNF233A6NK53 670 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 EFCAB8A8MWE9 144 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 MAP2K7O14733 419 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 NPC1O15118 1278 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 COQ9O75208 318 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ITGB3P05106 788 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 CKMP06732 381 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TRIM21P19474 475 aaKnown RBP6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TFAMQ00059 246 aaKnown RBP6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TNK2Q07912 1038 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 LPAL2Q16609 132 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TXNDC8Q6A555 127 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TRIM65Q6PJ69 517 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 CYP2U1Q7Z449 544 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 SYCP3Q8IZU3 236 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 FMR1NBQ8N0W7 255 aaPredicted RBP6.37□□□□□ -1.39
PTPRR-204ENST00000440835 MYCBPAPQ8TBZ2 947 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 WHAMMQ8TF30 809 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 DNAJC19Q96DA6 116 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ZFYVE19Q96K21 471 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 PI4K2AQ9BTU6 479 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 EDEM2Q9BV94 578 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 PARD6BQ9BYG5 372 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ZHX3Q9H4I2 956 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 A0A1B0GVL5 298 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ZNF202O95125 648 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 SMC2O95347 1197 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 APODP05090 189 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ARSAP15289 507 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 HDCP19113 662 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 HNRNPH1P31943 449 aaKnown RBP6.37□□□□□ -1.39
PTPRR-204ENST00000440835 GRIA2P42262 883 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 ZNF132P52740 706 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 LONRF2Q1L5Z9 754 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 TDRD10Q5VZ19 366 aaKnown RBP6.37□□□□□ -1.39
PTPRR-204ENST00000440835 DENND5BQ6ZUT9 1274 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 LPCAT2Q7L5N7 544 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 C12orf56Q8IXR9 622 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 CEP57L1Q8IYX8 460 aa6.37□□□□□ -1.39
PTPRR-204ENST00000440835 CSGALNACT2Q8N6G5 542 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms