RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 K7ESF4 209 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 GADD45BO75293 160 aaPredicted RBP20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 DHCR24Q15392 516 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 PPP1R26Q5T8A7 1209 aaPredicted RBP20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 SNX30Q5VWJ9 437 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 GPRIN1Q7Z2K8 1008 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 ZC3H3Q8IXZ2 948 aaKnown RBP20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 WHAMMQ8TF30 809 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 NELFBQ8WX92 580 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 TMEM176AQ96HP8 235 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 CEP63Q96MT8 703 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 FBRSL1Q9HCM7 1045 aaKnown RBP20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 PNPLA8Q9NP80 782 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 SCML2Q9UQR0 700 aa20.95■□□□□ 0.94
SHROOM1-204ENST00000440118 FAM92AA1XBS5 289 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 ZDHHC11BP0C7U3 371 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 ADH5P11766 374 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 CNR2P34972 360 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 SEC13P55735 322 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 CETN1Q12798 172 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 LRMPQ12912 555 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 CUL2Q13617 745 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 BTBD8Q5XKL5 378 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 TADA2BQ86TJ2 420 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 DUSP16Q9BY84 665 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 FAM124BQ9H5Z6 455 aaPredicted RBP20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 NAGPAQ9UK23 515 aa20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 LSM7Q9UK45 103 aaKnown RBP20.94■□□□□ 0.94
SHROOM1-204ENST00000440118 CD19P15391 556 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 ATP5C1P36542 298 aaKnown RBP20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 LAIR1Q6GTX8 287 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 TATDN2Q93075 761 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 SLC35C1Q96A29 364 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 OTUB2Q96DC9 234 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 HHIPQ96QV1 700 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 USP18Q9UMW8 372 aa20.93■□□□□ 0.94
SHROOM1-204ENST00000440118 A0A1W2PQH9 124 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 APODP05090 189 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 CCDC192P0DO97 292 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 RALAP11233 206 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 CD44P16070 742 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 TBXAS1P24557 533 aaPredicted RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 OPRD1P41143 372 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 PXNP49023 591 aaPredicted RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 FMO5P49326 533 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 RAD23BP54727 409 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 KDSRQ06136 332 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 PAK1Q13153 545 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 SRSF5Q13243 272 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 ANO4Q32M45 955 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 C10orf120Q5SQS8 335 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 WDR5BQ86VZ2 330 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 ADGRG2Q8IZP9 1017 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 GPR161Q8N6U8 529 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 SLC4A11Q8NBS3 891 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 ZFRQ96KR1 1074 aaKnown RBP20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 HESX1Q9UBX0 185 aa20.92■□□□□ 0.94
SHROOM1-204ENST00000440118 HHLA1C9JL84 531 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 RARGP13631 454 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 HOXA6P31267 233 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 ID4P47928 161 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 PSEN1P49768 467 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 KIF11P52732 1056 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 STX17P56962 302 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 MCCD1P59942 119 aaPredicted RBP20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 GAD2Q05329 585 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 MORC3Q14149 939 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 GOLGA7BQ2TAP0 167 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 SGO2Q562F6 1265 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 C2orf27AQ580R0 203 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 LY6G5CQ5SRR4 150 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 BBS7Q8IWZ6 715 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 NT5C1BQ96P26 610 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 PNKPQ96T60 521 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 CYLDQ9NQC7 956 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 ARHGEF4Q9NR80 690 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 COQ4Q9Y3A0 265 aa20.91■□□□□ 0.94
SHROOM1-204ENST00000440118 CEP250Q9BV73 2442 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 EML5Q05BV3 1969 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 RPP40O75818 363 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 TBX18O95935 607 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 PGFP49763 221 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 UBE2HP62256 183 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 DMC1Q14565 340 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 TTI2Q6NXR4 508 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 RSRC2Q7L4I2 434 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 SYT13Q7L8C5 426 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 CCDC186Q7Z3E2 898 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 CAMKK1Q8N5S9 505 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 TSTD1Q8NFU3 115 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 CDK5RAP1Q96SZ6 601 aaKnown RBP20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 CHMP5Q9NZZ3 219 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 DNMT3LQ9UJW3 386 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 NUDT5Q9UKK9 219 aa20.9■□□□□ 0.94
SHROOM1-204ENST00000440118 HRO43593 1189 aa20.89■□□□□ 0.93
SHROOM1-204ENST00000440118 KAT7O95251 611 aa20.89■□□□□ 0.93
SHROOM1-204ENST00000440118 APBB3O95704 486 aa20.89■□□□□ 0.93
SHROOM1-204ENST00000440118 GNA14O95837 355 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms