RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TECTAO75443 2155 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 TMCO5BA8MYB1 307 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MYO1CO00159 1063 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CYB561D2O14569 222 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 INPPL1O15357 1258 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 THAP12O43422 761 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MBTPS2O43462 519 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 TCEA3O75764 348 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PDGFBP01127 241 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 CALCAP01258 141 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 MYL4P12829 197 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 TBXAS1P24557 533 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 ATP5DP30049 168 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 HSD17B3P37058 310 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 GPR15P49685 360 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PDE6CP51160 858 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 LILRA4P59901 499 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 DR1Q01658 176 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PLCB3Q01970 1234 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 CENPCQ03188 943 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 POU5F1BQ06416 359 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PSMD6Q15008 389 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 SURF1Q15526 300 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 DUSP6Q16828 381 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 FAM187BQ17R55 369 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 AAK1Q2M2I8 961 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 OVOS1Q6IE37 1185 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ACAD10Q6JQN1 1059 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 RNF19BQ6ZMZ0 732 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 IFNLR1Q8IU57 520 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 GPD1LQ8N335 351 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 BEST2Q8NFU1 509 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 EPS8L1Q8TE68 723 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 PARD3BQ8TEW8 1205 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 ATXN2LQ8WWM7 1075 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 TLCD1Q96CP7 247 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 SENP8Q96LD8 212 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 FMO2Q99518 471 aa5□□□□□ -1.61
EDEM3-203ENST00000439962 RPP25Q9BUL9 199 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 FRMD8P1Q9BZ68 369 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 RNF216Q9NWF9 866 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 AJAP1Q9UKB5 411 aaPredicted RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 CPSF3Q9UKF6 684 aaKnown RBP5□□□□□ -1.61
EDEM3-203ENST00000439962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5□□□□□ -1.61
EDEM3-203ENST00000439962 FAM186AA6NE01 2351 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 WDR27A2RRH5 827 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FOXN3O00409 490 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FSCN2O14926 492 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TRAPPC3O43617 180 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 EXTL3O43909 919 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FAM107AO95990 144 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 AGTP01019 485 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CFHP08603 1231 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 LMO2P25791 158 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PTPN7P35236 360 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 USP8P40818 1118 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PEX5P50542 639 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CLCN4P51793 760 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 GNGT1P63211 74 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 SLC7A5Q01650 507 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ROR1Q01973 937 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ARID5AQ03989 594 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CYP24A1Q07973 514 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TRPC3Q13507 836 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 DDR2Q16832 855 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PPM1LQ5SGD2 360 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ATAT1Q5SQI0 421 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 STXBP5Q5T5C0 1151 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 C6orf118Q5T5N4 469 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ZPBP2Q6X784 338 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 C1orf127Q8N9H9 656 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 SMRP1Q8NCR6 262 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FLCNQ8NFG4 579 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 OR6B3Q8NGW1 331 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 RSPH1Q8WYR4 309 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 TCEAL4Q96EI5 215 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 DDX27Q96GQ7 796 aaKnown RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CRISPLD1Q9H336 500 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PABPC3Q9H361 631 aaKnown RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ACTR5Q9H9F9 607 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 UBE2TQ9NPD8 197 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 ZDHHC18Q9NUE0 388 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PLAAQ9Y263 795 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 SCINQ9Y6U3 715 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 COL4A4P53420 1690 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 LAMA5O15230 3695 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 C2CD4DB7Z1M9 353 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PIK3R2O00459 728 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 CLDN5O00501 218 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 NRG2O14511 850 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PSTPIP1O43586 416 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FGGP02679 453 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 FTLP02792 175 aaPredicted RBP4.99□□□□□ -1.61
EDEM3-203ENST00000439962 RARGP13631 454 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PROZP22891 400 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 PTGIRP43119 386 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 RWDD2BP57060 319 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 MYL6P60660 151 aa4.99□□□□□ -1.61
EDEM3-203ENST00000439962 COPS2P61201 443 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms