RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CYTH4Q9UIA0 394 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 NAGPAQ9UK23 515 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 FBXL21Q9UKT6 434 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 PCDHGC3Q9UN70 934 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 ARHGAP26Q9UNA1 814 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 ZDBF2Q9HCK1 2354 aa20.48■□□□□ 0.87
SEMA3B-206ENST00000439487 COL4A2P08572 1712 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 TMEM221A6NGB7 291 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 M0R296 226 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 ZNF263O14978 683 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 TLR5O60602 858 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 TBX18O95935 607 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 RARGP13631 454 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 CYP11B1P15538 503 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 KRT9P35527 623 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 SOX5P35711 763 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 STAT1P42224 750 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 TUBP50607 506 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 SLC7A9P82251 487 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 ZXDBP98169 803 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 FCHO2Q0JRZ9 810 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 MEA1Q16626 185 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 IER5LQ5T953 404 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 PM20D1Q6GTS8 502 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 SH3RF2Q8TEC5 729 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 ASIC4Q96FT7 647 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 ZFYVE19Q96K21 471 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 ST7Q9NRC1 585 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 SMPD4Q9NXE4 827 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 NUDT5Q9UKK9 219 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 CA14Q9ULX7 337 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 CPQQ9Y646 472 aa20.47■□□□□ 0.87
SEMA3B-206ENST00000439487 COL4A3Q01955 1670 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 A0A1W2PQC6 194 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 YWHAGP61981 247 aaKnown RBP eCLIP20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 ZNF77Q15935 545 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 TAF3Q5VWG9 929 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 BHLHA9Q7RTU4 235 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 CACNA2D4Q7Z3S7 1137 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 NOP9Q86U38 636 aaKnown RBP20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 WDTC1Q8N5D0 677 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 C11orf16Q9NQ32 467 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 CNGB3Q9NQW8 809 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 IFNKQ9P0W0 207 aa20.46■□□□□ 0.87
SEMA3B-206ENST00000439487 LEFTY2O00292 366 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 MDM4O15151 490 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 CHADO15335 359 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 RPL34P49207 117 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 PSEN1P49768 467 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 DAOAP59103 153 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 USP4Q13107 963 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 ARHGAP29Q52LW3 1261 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 ARHGAP18Q8N392 663 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 CLEC4CQ8WTT0 213 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 STK32AQ8WU08 396 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 DDX1Q92499 740 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 IRF7Q92985 503 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 SLC4A5Q9BY07 1137 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 NACA2Q9H009 215 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 MIS12Q9H081 205 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 LHX5Q9H2C1 402 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 PDCL3Q9H2J4 239 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 CYLDQ9NQC7 956 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 THG1LQ9NWX6 298 aaKnown RBP20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 WNT16Q9UBV4 365 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 MIA3Q5JRA6 1907 aa20.45■□□□□ 0.86
SEMA3B-206ENST00000439487 KRBA1A5PL33 1030 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 YJEFN3A6XGL0 299 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 E7ENQ6 273 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 PDGFBP01127 241 aaPredicted RBP20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 RALAP11233 206 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 TCF3P15923 654 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 ATP5C1P36542 298 aaKnown RBP20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 PFKPQ01813 784 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 MTF1Q14872 753 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 C10orf120Q5SQS8 335 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 SIX5Q8N196 739 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 SCML4Q8N228 414 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 C1orf131Q8NDD1 294 aaKnown RBP20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 EPS8L1Q8TE68 723 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 SLC20A1Q8WUM9 679 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 GKN1Q9NS71 199 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 CLIC5Q9NZA1 410 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 TJP2Q9UDY2 1190 aa20.44■□□□□ 0.86
SEMA3B-206ENST00000439487 E5RJQ4 531 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 ARNTLO00327 626 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 FBXO21O94952 628 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 MMEP08473 750 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 PBX1P40424 430 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 ACADSBP45954 432 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 ARID5AQ03989 594 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 PDCLQ13371 301 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 SLC44A4Q53GD3 710 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 BTBD8Q5XKL5 378 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 CC2D1AQ6P1N0 951 aaPredicted RBP20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 HFE2Q6ZVN8 426 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 SCUBE3Q8IX30 993 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 DNASE1L2Q92874 299 aa20.43■□□□□ 0.86
SEMA3B-206ENST00000439487 ZFRQ96KR1 1074 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms