RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 PTPN2P17706 415 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 PFKLP17858 780 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 TUBP50607 506 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 USP46P62068 366 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ADAM15Q13444 863 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ADGRE1Q14246 886 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 BHLHA9Q7RTU4 235 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 CCAR2Q8N163 923 aaKnown RBP13.3□□□□□ -0.28
SCLT1-202ENST00000439369 VN1R2Q8NFZ6 395 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 FEZF2Q8TBJ5 459 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ARHGEF26Q96DR7 871 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 SLC2A13Q96QE2 648 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 NCAPGQ9BPX3 1015 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 LACRTQ9GZZ8 138 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ABCC13Q9NSE7 274 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 CTTNBP2NLQ9P2B4 639 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 MYO1AQ9UBC5 1043 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 ZMYM5Q9UJ78 669 aa13.3□□□□□ -0.28
SCLT1-202ENST00000439369 MYH10P35580 1976 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 RCCD1A6NED2 376 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 YJEFN3A6XGL0 299 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 E7ENQ6 273 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 DPYSL4O14531 572 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 GLP2RO95838 553 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 CDC25CP30307 473 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 NOS2P35228 1153 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 ARHGAP25P42331 645 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 YWHAGP61981 247 aaKnown RBP eCLIP13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TAF10Q12962 218 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 ACAP1Q15027 740 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 ARHGAP29Q52LW3 1261 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 C2CD6Q53TS8 623 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 BSPRYQ5W0U4 402 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 LLGL2Q6P1M3 1020 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TADA2BQ86TJ2 420 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TMC8Q8IU68 726 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 REXO1L1PQ8IX06 675 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 STKLD1Q8NE28 680 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 SLC35G2Q8TBE7 412 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
SCLT1-202ENST00000439369 GPR152Q8TDT2 470 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 KHSRPQ92945 711 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■□□ 17.2
SCLT1-202ENST00000439369 LRRC3Q9BY71 257 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 ASAH2Q9NR71 780 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 METTL5Q9NRN9 209 aaKnown RBP13.29□□□□□ -0.28
SCLT1-202ENST00000439369 OLA1Q9NTK5 396 aaKnown RBP13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TRPM5Q9NZQ8 1165 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 CLUHO75153 1309 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 TRIOBPQ9H2D6 2365 aa13.29□□□□□ -0.28
SCLT1-202ENST00000439369 CCDC195A0A1B0GUA6 201 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 C2CD4BA6NLJ0 364 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 PIK3R2O00459 728 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 ZNF197O14709 1029 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 ATMINO43313 823 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 RFPL2O75678 378 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 RALAP11233 206 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MAN1A1P33908 653 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 RFC1P35251 1148 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MATKP42679 507 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 PTPN9P43378 593 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 ITIH3Q06033 890 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MTMR3Q13615 1198 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 PIGHQ14442 188 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 BTBD8Q5XKL5 378 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 ANKRD54Q6NXT1 300 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MSANTD2Q6P1R3 559 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 KLHDC10Q6PID8 442 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 SCD5Q86SK9 330 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 DNAAF5Q86Y56 855 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 NIPA2Q8N8Q9 360 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 CLEC4CQ8WTT0 213 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 FAM149B1Q96BN6 582 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 ZNF707Q96C28 371 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 PIWIL1Q96J94 861 aaKnown RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MCEEQ96PE7 176 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 GCNAQ96QF7 691 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 CNPY3Q9BT09 278 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 IGFLR1Q9H665 355 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 IL21Q9HBE4 155 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■□ 24
SCLT1-202ENST00000439369 GMIPQ9P107 970 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 IP6K2Q9UHH9 426 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 STAP1Q9ULZ2 295 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 GREB1Q4ZG55 1949 aa13.28□□□□□ -0.28
SCLT1-202ENST00000439369 RANBP2P49792 3224 aaKnown RBP13.28□□□□□ -0.28
SCLT1-202ENST00000439369 A0A1W2PQH9 124 aa13.27□□□□□ -0.29
SCLT1-202ENST00000439369 ZNF840PA6NDX5 716 aa13.27□□□□□ -0.29
SCLT1-202ENST00000439369 MYO1FO00160 1098 aa13.27□□□□□ -0.29
SCLT1-202ENST00000439369 CAPN9O14815 690 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms