RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 PIK3R2O00459 728 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 XPO1O14980 1071 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 TLR5O60602 858 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 ZNF18P17022 549 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 PFKLP17858 780 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 EEF1GP26641 437 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 CTHP32929 405 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 RGS7P49802 495 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 BCAT1P54687 386 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 BST2Q10589 180 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 RUNX3Q13761 415 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 ANO6Q4KMQ2 910 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 DENND1BQ6P3S1 775 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 SLC35F5Q8WV83 523 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 SECISBP2LQ93073 1101 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 SHDQ96IW2 340 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 ULBP1Q9BZM6 244 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 FBRSL1Q9HCM7 1045 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 CYLDQ9NQC7 956 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 CFAP97Q9P2B7 532 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 CYTH4Q9UIA0 394 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 NDRG2Q9UN36 371 aaKnown RBP13.98□□□□□ -0.17
LINC00399-201ENST00000439008 FHOD1Q9Y613 1164 aa13.98□□□□□ -0.17
LINC00399-201ENST00000439008 DMDP11532 3685 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 ANTXRLA6NF34 631 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 EPHB6O15197 1021 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 GALR2O43603 387 aaPredicted RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 MBL2P11226 248 aaPredicted RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 ATP1A3P13637 1013 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 KRT5P13647 590 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 CLCN1P35523 988 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 PLA2G4AP47712 749 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 TUBP50607 506 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 TKTL1P51854 596 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 MYL5Q02045 173 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 GAS6Q14393 721 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 ITPRIPL2Q3MIP1 535 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 PM20D1Q6GTS8 502 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 MAML2Q8IZL2 1156 aaPredicted RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 AOPEPQ8N6M6 819 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 DTWD2Q8NBA8 298 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 CSGALNACT1Q8TDX6 532 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 CLEC4CQ8WTT0 213 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 FAM3CQ92520 227 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 CLDN23Q96B33 292 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 P2RY11Q96G91 374 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 PHOX2BQ99453 314 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 NAA15Q9BXJ9 866 aaKnown RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 KLF16Q9BXK1 252 aaPredicted RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 TLR8Q9NR97 1041 aaKnown RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 RBM12Q9NTZ6 932 aaKnown RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 THG1LQ9NWX6 298 aaKnown RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 DUS2Q9NX74 493 aaKnown RBP13.97□□□□□ -0.17
LINC00399-201ENST00000439008 DNAJC12Q9UKB3 198 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 HCN4Q9Y3Q4 1203 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 FRYLO94915 3013 aa13.97□□□□□ -0.17
LINC00399-201ENST00000439008 H0Y858 1186 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 M0QYV0 167 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 CHRNB1P11230 501 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 RARGP13631 454 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 TRIM21P19474 475 aaKnown RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 HOXC13P31276 330 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 GPD2P43304 727 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 KPNA1P52294 538 aaPredicted RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 MFAP3P55082 362 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 MLLT6P55198 1093 aaPredicted RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 MESP2Q0VG99 397 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 PON2Q15165 354 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 KLHL40Q2TBA0 621 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 KLHDC7AQ5VTJ3 777 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 ZNF852Q6ZMS4 543 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 WDTC1Q8N5D0 677 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 ZNF606Q8WXB4 792 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 KCTD13Q8WZ19 329 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 EZH1Q92800 747 aaPredicted RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 OSBPL6Q9BZF3 934 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 GANQ9H2C0 597 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 ECT2Q9H8V3 914 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 C2orf42Q9NWW7 574 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 HESX1Q9UBX0 185 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 TJP2Q9UDY2 1190 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 LIMA1Q9UHB6 759 aaKnown RBP13.96□□□□□ -0.17
LINC00399-201ENST00000439008 NAGPAQ9UK23 515 aa13.96□□□□□ -0.17
LINC00399-201ENST00000439008 USP34Q70CQ2 3546 aa13.95□□□□□ -0.18
LINC00399-201ENST00000439008 YJEFN3A6XGL0 299 aa13.95□□□□□ -0.18
LINC00399-201ENST00000439008 E7ENQ6 273 aa13.95□□□□□ -0.18
LINC00399-201ENST00000439008 PES1O00541 588 aaKnown RBP13.95□□□□□ -0.18
LINC00399-201ENST00000439008 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
LINC00399-201ENST00000439008 ZBED1O96006 694 aa13.95□□□□□ -0.18
LINC00399-201ENST00000439008 SETSIPP0DME0 302 aa13.95□□□□□ -0.18
LINC00399-201ENST00000439008 IRF1P10914 325 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms