RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 DNAH12Q6ZR08 3092 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 FMN2Q9NZ56 1722 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 UGGT2Q9NYU1 1516 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 USP6P35125 1406 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 DCCP43146 1447 aa3.7□□□□□ -1.82
HMGB1P18-201ENST00000438801 USP34Q70CQ2 3546 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 SMIM35A0A1B0GVV1 85 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 A0A1W2PPC1 479 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 KCNU1A8MYU2 1149 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ADAMTS3O15072 1205 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 TOP3BO95985 862 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 FESP07332 822 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 NPSP0C0P6 89 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 SFPQP23246 707 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PPIFP30405 207 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 MMP13P45452 471 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PDE1AP54750 535 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 LILRA4P59901 499 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 IQCB1Q15051 598 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ARHGAP40Q5TG30 622 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 USP45Q70EL2 814 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PARS2Q7L3T8 475 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PRPF38AQ8NAV1 312 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PCSK9Q8NBP7 692 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 MAFAQ8NHW3 353 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 RP9Q8TA86 221 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 CYP2W1Q8TAV3 490 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ATG4AQ8WYN0 398 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 GLG1Q92896 1179 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PUS7Q96PZ0 661 aaKnown RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ASB2Q96Q27 587 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 MACROD1Q9BQ69 325 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PTDSS2Q9BVG9 487 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 FSD1LQ9BXM9 530 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PRSS22Q9GZN4 317 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 GLOD4Q9HC38 313 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ANLNQ9NQW6 1124 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PNPOQ9NVS9 261 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ELOVL5Q9NYP7 299 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 ADAMTS5Q9UNA0 930 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 NOTCH2Q04721 2471 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 LAMC1P11047 1609 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PASKQ96RG2 1323 aa3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 PTPRZ1P23471 2315 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P18-201ENST00000438801 LAMB2P55268 1798 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 PAPPA2Q9BXP8 1791 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 NRAPQ86VF7 1730 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 CYP2D7A0A087X1C5 515 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 A1L4Q6 167 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 POU2F2P09086 479 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 HDCP19113 662 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 RECQLP46063 649 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 CCT4P50991 539 aaKnown RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 EVA1CP58658 441 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 DAZAP2Q15038 168 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 AMOTQ4VCS5 1084 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 EMC10Q5UCC4 262 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 TRIM72Q6ZMU5 477 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 CNGA4Q8IV77 575 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 GALNT16Q8N428 558 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 C8orf58Q8NAV2 365 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 BRIX1Q8TDN6 353 aaKnown RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 C5orf34Q96MH7 638 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 SMAD5Q99717 465 aaKnown RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 SPRTNQ9H040 489 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 VPS16Q9H269 839 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 TUBA8Q9NY65 449 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 NDRG4Q9ULP0 352 aaKnown RBP3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 SPEF1Q9Y4P9 236 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 ADGRB3O60242 1522 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 WASHC2CQ9Y4E1 1318 aa3.68□□□□□ -1.82
HMGB1P18-201ENST00000438801 C2CD3Q4AC94 2353 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 MED19A0JLT2 244 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 H3BUI4 141 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 H7C1Q1 480 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 TRIM38O00635 465 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 HOXB6P17509 224 aaKnown RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 ARHGAP25P42331 645 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 NR4A2P43354 598 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 SOX8P57073 446 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 NKX6-1P78426 367 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 AMPD3Q01432 767 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 GTF2H3Q13889 308 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 E2F2Q14209 437 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 PLS1Q14651 629 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 PGS1Q32NB8 556 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 CCDC157Q569K6 752 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 RGS7BPQ6MZT1 257 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 Q6ZWC4 215 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 TECPR1Q7Z6L1 1165 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 XAGE5Q8WWM1 108 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 R3HDM4Q96D70 268 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 DAZAP1Q96EP5 407 aaKnown RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 PRO3102Q9H379 93 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 PDGFCQ9NRA1 345 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 CCNL1Q9UK58 526 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 PLEKHM1Q9Y4G2 1056 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 EEA1Q15075 1411 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 SSH2Q76I76 1423 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 SPATA31A5Q5VU36 1347 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms