RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 EXOC5O00471 708 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 TPD52L2O43399 206 aaKnown RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 VIPP01282 170 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 MYCLP12524 364 aaPredicted RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 KRT4P19013 534 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 GKP32189 559 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 CYP2C18P33260 490 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 IL6STP40189 918 aaPredicted RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 ATP1A4Q13733 1029 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 PUM3Q15397 648 aaKnown RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 AARS2Q5JTZ9 985 aaKnown RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 CLEC9AQ6UXN8 241 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 LDLRAD3Q86YD5 345 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 FSTL5Q8N475 847 aaPredicted RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 VPS37AQ8NEZ2 397 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 ABHD11Q8NFV4 315 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 POF1BQ8WVV4 589 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 TBC1D5Q92609 795 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 GRAMD1AQ96CP6 724 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 ARPC5LQ9BPX5 153 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 NUDT22Q9BRQ3 303 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 PCED1AQ9H1Q7 454 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 VPS51Q9UID3 782 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 SLC27A6Q9Y2P4 619 aa4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 ARID4BQ4LE39 1312 aaPredicted RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 WDR33Q9C0J8 1336 aaKnown RBP4.44□□□□□ -1.7
LSM1P1-201ENST00000438629 OR2W5A6NFC9 320 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 ZSCAN9O15535 394 aaPredicted RBP4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 PMPCBO75439 489 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 NPSP0C0P6 89 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SRGAP2BP0DMP2 458 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 CREB1P16220 341 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 CCT8P50990 548 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 CLCN2P51788 898 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 DGKQP52824 942 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 CACNA2D1P54289 1103 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 EEFSECP57772 596 aaKnown RBP4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SIM1P81133 766 aaPredicted RBP4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 BLMHQ13867 455 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 PTK2BQ14289 1009 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 TRIM71Q2Q1W2 868 aaKnown RBP4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 ZACNQ401N2 412 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 RAP1GAP2Q684P5 730 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 ABLIM2Q6H8Q1 611 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 Q6ZWC4 215 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 USP49Q70CQ1 688 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 GATAD2AQ86YP4 633 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 RASGRP3Q8IV61 690 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SLC16A11Q8NCK7 471 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SUN3Q8TAQ9 357 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 TIMP4Q99727 224 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SNX15Q9NRS6 342 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 DUSP22Q9NRW4 184 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 DLL3Q9NYJ7 618 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 TFCP2L1Q9NZI6 479 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 TLK1Q9UKI8 766 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 AMFRQ9UKV5 643 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 DTNAQ9Y4J8 743 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 ENTPD2Q9Y5L3 495 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 SALL3Q9BXA9 1300 aa4.43□□□□□ -1.7
LSM1P1-201ENST00000438629 LINC00473A8K010 186 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 TMPRSS11DO60235 418 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 NTSR2O95665 410 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 ERBB2P04626 1255 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 EBLN1P0CF75 366 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 TMEM225BP0DP42 221 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 MST1P26927 711 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 EIF4A1P60842 406 aaKnown RBP4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 KLF10Q13118 480 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 SPARCL1Q14515 664 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 PFKFB4Q16877 469 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 GRAMD1BQ3KR37 738 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 C4orf46Q504U0 113 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 TMTC4Q5T4D3 741 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 OLFML1Q6UWY5 402 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 PTCHD4Q6ZW05 846 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 SFTPA1Q8IWL2 248 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 SMC5Q8IY18 1101 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 WDR60Q8WVS4 1066 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 OVCA2Q8WZ82 227 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 RSC1A1Q92681 617 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 EID2BQ96D98 161 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 PRPF18Q99633 342 aaKnown RBP4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 FSD1LQ9BXM9 530 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 CHMP4AQ9BY43 222 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 RXFP3Q9NSD7 469 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 MGAT4CQ9UBM8 478 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 RIMKLBQ9ULI2 386 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 ADAMTS5Q9UNA0 930 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 INSL6Q9Y581 213 aa4.42□□□□□ -1.7
LSM1P1-201ENST00000438629 AP4M1O00189 453 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 CES2O00748 559 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 PIP5K1BO14986 540 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 TCEA3O75764 348 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 WDR47O94967 919 aa4.41□□□□□ -1.7
LSM1P1-201ENST00000438629 VNN1O95497 513 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms