RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 EXOC1Q9NV70 894 aa8.26□□□□□ -1.09
VPS50-204ENST00000438395 KBTBD4Q9NVX7 518 aa8.26□□□□□ -1.09
VPS50-204ENST00000438395 SMPD4Q9NXE4 827 aa8.26□□□□□ -1.09
VPS50-204ENST00000438395 CFAP97Q9P2B7 532 aa8.26□□□□□ -1.09
VPS50-204ENST00000438395 CGNQ9P2M7 1197 aaKnown RBP8.26□□□□□ -1.09
VPS50-204ENST00000438395 TFIP11Q9UBB9 837 aaKnown RBP8.26□□□□□ -1.09
VPS50-204ENST00000438395 NXF1Q9UBU9 619 aaKnown RBP8.26□□□□□ -1.09
VPS50-204ENST00000438395 PTPRJQ12913 1337 aa8.26□□□□□ -1.09
VPS50-204ENST00000438395 SCN1AP35498 2009 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 LEFTY2O00292 366 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CLIC2O15247 247 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 TACC1O75410 805 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 RTN3O95197 1032 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 APODP05090 189 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 ADRB1P08588 477 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 MBL2P11226 248 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 BMP2P12643 396 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 PDIA4P13667 645 aaKnown RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 TCF3P15923 654 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 PTPN1P18031 435 aaKnown RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 LMO2P25791 158 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 ATICP31939 592 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 LIMK1P53667 647 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 AP3M2P53677 418 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 SEC13P55735 322 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 NOP14P78316 857 aaKnown RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 CYP24A1Q07973 514 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CBLBQ13191 982 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 PREPLQ4J6C6 727 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 C2orf27AQ580R0 203 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 ZNF667Q5HYK9 610 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 STPG1Q5TH74 334 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 BTBD8Q5XKL5 378 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 RNF43Q68DV7 783 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 NAIF1Q69YI7 327 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 UNC13DQ70J99 1090 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 FILIP1Q7Z7B0 1213 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 B3GALNT2Q8NCR0 500 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CXorf38Q8TB03 319 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 RIN3Q8TB24 985 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 FBXO32Q969P5 355 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 C8orf48Q96LL4 319 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 PCMTD1Q96MG8 357 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 MRPL45Q9BRJ2 306 aaKnown RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 EDEM2Q9BV94 578 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 DNAI2Q9GZS0 605 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 GCNT4Q9P109 453 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 BCCIPQ9P287 314 aaKnown RBP eCLIP8.25□□□□□ -1.09
VPS50-204ENST00000438395 TBC1D14Q9P2M4 693 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 ANGPTL2Q9UKU9 493 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 CPQQ9Y646 472 aa8.25□□□□□ -1.09
VPS50-204ENST00000438395 NUP210Q8TEM1 1887 aaPredicted RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 MAP1BP46821 2468 aaKnown RBP8.25□□□□□ -1.09
VPS50-204ENST00000438395 ZNF840PA6NDX5 716 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 SCAMP3O14828 347 aaKnown RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 POLR2DO15514 142 aaKnown RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 CAVIN2O95810 425 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 CYP17A1P05093 508 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 FAM163BP0C2L3 166 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 ADH5P11766 374 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 YWHAQP27348 245 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 AFMP43652 599 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 RAP1GAPP47736 663 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 MYL6P60660 151 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 SLC7A9P82251 487 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 GOLGA8FQ08AF8 430 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 GOLGA8DPQ0D2H9 430 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 TAF10Q12962 218 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 PLK5Q496M5 336 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 PPP1R26Q5T8A7 1209 aaPredicted RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 DAB2IPQ5VWQ8 1189 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 CNNM4Q6P4Q7 775 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 SCARA5Q6ZMJ2 495 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 EPM2AIP1Q7L775 607 aaPredicted RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 NUP93Q8N1F7 819 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 LINC00528Q8N1L1 170 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 CCDC33Q8N5R6 958 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 MEIOBQ8N635 442 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 KIAA1958Q8N8K9 716 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 ADAM32Q8TC27 787 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 ZNF507Q8TCN5 953 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 USP33Q8TEY7 942 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 WHAMMQ8TF30 809 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 CCDC47Q96A33 483 aaKnown RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 SMARCD1Q96GM5 515 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 ZC3H10Q96K80 434 aaKnown RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 C7orf25Q9BPX7 421 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 TTLL2Q9BWV7 592 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 TPSD1Q9BZJ3 242 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 IMPG2Q9BZV3 1241 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 ZNF518BQ9C0D4 1074 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 BLZF1Q9H2G9 400 aa8.24□□□□□ -1.09
VPS50-204ENST00000438395 FBRSL1Q9HCM7 1045 aaKnown RBP8.24□□□□□ -1.09
VPS50-204ENST00000438395 POLMQ9NP87 494 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms