RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SYCP1Q15431 976 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 NFKBIBQ15653 356 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 PM20D1Q6GTS8 502 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 ASTLQ6HA08 431 aaPredicted RBP17.22■□□□□ 0.35
CTSD-205ENST00000438213 FAM71AQ8IYT1 594 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 C8orf33Q9H7E9 229 aaPredicted RBP17.22■□□□□ 0.35
CTSD-205ENST00000438213 CCSER2Q9H7U1 834 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 TBC1D17Q9HA65 648 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 CYLDQ9NQC7 956 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 HEBP1Q9NRV9 189 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 CLIC5Q9NZA1 410 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 MRPS17Q9Y2R5 130 aaKnown RBP17.22■□□□□ 0.35
CTSD-205ENST00000438213 FHOD1Q9Y613 1164 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 CPQQ9Y646 472 aa17.22■□□□□ 0.35
CTSD-205ENST00000438213 ANAPC1Q9H1A4 1944 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 GOLGA6L19H0YKK7 550 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 LEFTY2O00292 366 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 SLC9A3R1O14745 358 aaPredicted RBP17.21■□□□□ 0.35
CTSD-205ENST00000438213 RARGP13631 454 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 CLCN1P35523 988 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 KRT9P35527 623 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 GPD2P43304 727 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ACADSBP45954 432 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ZNF77Q15935 545 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ITPRIPL2Q3MIP1 535 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 PMF1Q6P1K2 205 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 KLHDC10Q6PID8 442 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 C1orf228Q6PIY5 440 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ZNF852Q6ZMS4 543 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 SCML4Q8N228 414 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 STK32AQ8WU08 396 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ZFYVE19Q96K21 471 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ERGIC2Q96RQ1 377 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 FAM83CQ9BQN1 747 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 NAA15Q9BXJ9 866 aaKnown RBP17.21■□□□□ 0.35
CTSD-205ENST00000438213 ULBP1Q9BZM6 244 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 CBX8Q9HC52 389 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 CNGB3Q9NQW8 809 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 FAM207AQ9NSI2 230 aaPredicted RBP17.21■□□□□ 0.35
CTSD-205ENST00000438213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTSD-205ENST00000438213 DUS2Q9NX74 493 aaKnown RBP17.21■□□□□ 0.35
CTSD-205ENST00000438213 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 DNMT3LQ9UJW3 386 aa17.21■□□□□ 0.35
CTSD-205ENST00000438213 ZDBF2Q9HCK1 2354 aa17.21■□□□□ 0.34
CTSD-205ENST00000438213 NUP210Q8TEM1 1887 aaPredicted RBP17.2■□□□□ 0.34
CTSD-205ENST00000438213 KANSL1LA0AUZ9 987 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 ARNTLO00327 626 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 FBXO21O94952 628 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 LCP1P13796 627 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 AVPR2P30518 371 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 IFNAR2P48551 515 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 PGFP49763 221 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 RGS7P49802 495 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 POLR2FP61218 127 aaKnown RBP17.2■□□□□ 0.34
CTSD-205ENST00000438213 YWHAGP61981 247 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTSD-205ENST00000438213 AMPD2Q01433 879 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 GOLGA8FQ08AF8 430 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 GOLGA8DPQ0D2H9 430 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 ADIGQ0VDE8 80 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 USP4Q13107 963 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 NR1H3Q13133 447 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 C10orf120Q5SQS8 335 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 TPRG1Q6ZUI0 275 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 APTXQ7Z2E3 356 aaKnown RBP17.2■□□□□ 0.34
CTSD-205ENST00000438213 SCD5Q86SK9 330 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 OSCP1Q8WVF1 389 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 MSANTD3Q96H12 275 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 NMUR1Q9HB89 426 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 CFAP97Q9P2B7 532 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 AJAP1Q9UKB5 411 aaPredicted RBP17.2■□□□□ 0.34
CTSD-205ENST00000438213 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 SIT1Q9Y3P8 196 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 PIAS3Q9Y6X2 628 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 OBSL1O75147 1896 aa17.2■□□□□ 0.34
CTSD-205ENST00000438213 E2F8A0AVK6 867 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 NCAM2O15394 837 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 SERPINC1P01008 464 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 SNX16P57768 344 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 RUNX3Q13761 415 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 IER5LQ5T953 404 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 BTBD8Q5XKL5 378 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 DENND1BQ6P3S1 775 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 RSRC2Q7L4I2 434 aaKnown RBP17.19■□□□□ 0.34
CTSD-205ENST00000438213 SLC47A2Q86VL8 602 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
CTSD-205ENST00000438213 IRGQQ8WZA9 623 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 NOX5Q96PH1 765 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 DDX23Q9BUQ8 820 aaKnown RBP17.19■□□□□ 0.34
CTSD-205ENST00000438213 OSBPL6Q9BZF3 934 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 GANQ9H2C0 597 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 LHX5Q9H2C1 402 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 ACP6Q9NPH0 428 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
CTSD-205ENST00000438213 OSER1Q9NX31 292 aa17.19■□□□□ 0.34
CTSD-205ENST00000438213 GTSE1Q9NYZ3 720 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms