RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 C8orf48Q96LL4 319 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 DPEP3Q9H4B8 488 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 DNAAF2Q9NVR5 837 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 SEL1LQ9UBV2 794 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 CHORDC1Q9UHD1 332 aaPredicted RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 SH3BP1Q9Y3L3 701 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 PCDHB13Q9Y5F0 798 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 ASXL3Q9C0F0 2248 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 SMG1Q96Q15 3661 aaKnown RBP15.76■□□□□ 0.11
HDAC8-213ENST00000436675 KNL1Q8NG31 2342 aa15.76■□□□□ 0.11
HDAC8-213ENST00000436675 URB1O60287 2271 aaKnown RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 CELSR3Q9NYQ7 3312 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 FLNBO75369 2602 aaKnown RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 E2F8A0AVK6 867 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 ZBTB24O43167 697 aaPredicted RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 COCHO43405 550 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 NDUFV2P19404 249 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 YWHAQP27348 245 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 NTSR1P30989 418 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 SV2BQ7L1I2 683 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 TRMT11Q7Z4G4 463 aaKnown RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 RABEPKQ7Z6M1 372 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 NAXDQ8IW45 347 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 ETFBKMTQ8IXQ9 262 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 KIAA1958Q8N8K9 716 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 TERB1Q8NA31 727 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 MDM1Q8TC05 714 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 ZFRQ96KR1 1074 aaKnown RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 CEP295NLQ96MC4 621 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 CCDC86Q9H6F5 360 aaKnown RBP15.75■□□□□ 0.11
HDAC8-213ENST00000436675 CCSER2Q9H7U1 834 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 RAD54BQ9Y620 910 aa15.75■□□□□ 0.11
HDAC8-213ENST00000436675 HELZ2Q9BYK8 2649 aaKnown RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 A0A1W2PQF6 199 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 NDUFS2O75306 463 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 ZIC2O95409 532 aaPredicted RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 PTPN1P18031 435 aaKnown RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 HNRNPDQ14103 355 aaKnown RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 DUOXA2Q1HG44 320 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 RRAGBQ5VZM2 374 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 CBWD2Q8IUF1 395 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 CHPFQ8IZ52 775 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 IPO4Q8TEX9 1081 aaKnown RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 ADAMTS14Q8WXS8 1223 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 B3GNT5Q9BYG0 378 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 PANK2Q9BZ23 570 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 SPHK2Q9NRA0 654 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 DNAJC17Q9NVM6 304 aaKnown RBP15.74■□□□□ 0.11
HDAC8-213ENST00000436675 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
HDAC8-213ENST00000436675 A0A1W2PQD8 194 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 ZNF233A6NK53 670 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 HOXC11O43248 304 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-213ENST00000436675 GJB3O75712 270 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 BMP15O95972 392 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 CST3P01034 146 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-213ENST00000436675 HECTD3Q5T447 861 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 GRAMD4Q6IC98 578 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 SDE2Q6IQ49 451 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 KIAA1324Q6UXG2 1013 aaKnown RBP15.73■□□□□ 0.11
HDAC8-213ENST00000436675 CCNI2Q6ZMN8 369 aaPredicted RBP15.73■□□□□ 0.11
HDAC8-213ENST00000436675 NUDT18Q6ZVK8 323 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 TRAPPC11Q7Z392 1133 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 SLCO6A1Q86UG4 719 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 NUP93Q8N1F7 819 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 RDH13Q8NBN7 331 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 SCAMP5Q8TAC9 235 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 TMX3Q96JJ7 454 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 KCNK16Q96T55 309 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 TRIM9Q9C026 710 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 ELOVL4Q9GZR5 314 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 PANK4Q9NVE7 773 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 STK17AQ9UEE5 414 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
HDAC8-213ENST00000436675 A8MXQ7 604 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 ZNF217O75362 1048 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 GRIK2Q13002 908 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 PREPLQ4J6C6 727 aaPredicted RBP15.72■□□□□ 0.11
HDAC8-213ENST00000436675 LARP1BQ659C4 914 aaKnown RBP15.72■□□□□ 0.11
HDAC8-213ENST00000436675 MARCH9Q86YJ5 346 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 GLIS3Q8NEA6 775 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 KCNV2Q8TDN2 545 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 SETD7Q8WTS6 366 aaKnown RBP15.72■□□□□ 0.11
HDAC8-213ENST00000436675 HPS3Q969F9 1004 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 OTUB2Q96DC9 234 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 LRIG1Q96JA1 1093 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 MED10Q9BTT4 135 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 NACA2Q9H009 215 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 OLFML3Q9NRN5 406 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 CACNA2D2Q9NY47 1150 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 GMIPQ9P107 970 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 CLIC4Q9Y696 253 aa15.72■□□□□ 0.11
HDAC8-213ENST00000436675 WASH3PC4AMC7 463 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 PRRT4C9JH25 899 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 NEDD8-MDP1E9PL57 170 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 RTN3O95197 1032 aaPredicted RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
HDAC8-213ENST00000436675 GNSP15586 552 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 TNNI1P19237 187 aa15.71■□□□□ 0.11
HDAC8-213ENST00000436675 TNNC1P63316 161 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms