RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 GPAT2Q6NUI2 795 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 CDC73Q6P1J9 531 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TRPM8Q7Z2W7 1104 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 MTG1Q9BT17 334 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF232Q9UNY5 417 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ITGB3P05106 788 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 FGRP09769 529 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 WEE2P0C1S8 567 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 MAD2L1Q13257 205 aaPredicted RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 GALNTL6Q49A17 601 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 PMF1Q6P1K2 205 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 HHIPL2Q6UWX4 724 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 AGBL3Q8NEM8 1001 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 STARD8Q92502 1023 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 DDX47Q9H0S4 455 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 ABCG4Q9H172 646 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 SUCOQ9UBS9 1254 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TUBE1Q9UJT0 475 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 TDRKHQ9Y2W6 561 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 PIK3CDO00329 1044 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 AKR1B1P15121 316 aa11.55□□□□□ -0.56
SCN4A-201ENST00000435607 CELF1Q92879 486 aaKnown RBP11.55□□□□□ -0.56
SCN4A-201ENST00000435607 SPATA31A6Q5VVP1 1343 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SLC12A8A0AV02 714 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 RTN3O95197 1032 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 FMO5P49326 533 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 RFX8Q6ZV50 586 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 BTN2A1Q7KYR7 527 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 PALB2Q86YC2 1186 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 CCDC103Q8IW40 242 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SLC30A5Q8TAD4 765 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 UBA3Q8TBC4 463 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 QRFPRQ96P65 431 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 RIT2Q99578 217 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 CLEC4MQ9H2X3 399 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 NPHS2Q9NP85 383 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 PRKAG3Q9UGI9 489 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SH3GLB1Q9Y371 365 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TDP2O95551 362 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 AGTP01019 485 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 POLR2EP19388 210 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 ACO1P21399 889 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 EPHX2P34913 555 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TCF7P36402 384 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 PDX1P52945 283 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 BCAT1P54687 386 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 RESTQ13127 1097 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TSC22D1Q15714 1073 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 GAS2L1Q99501 681 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 GANQ9H2C0 597 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 ZMYND8Q9ULU4 1186 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 PCDHGB3Q9Y5G1 929 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 MGRN1O60291 552 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 CPSF4O95639 269 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 HLA-DRAP01903 254 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 NMT1P30419 496 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 LRRC71Q8N4P6 559 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 KCNB2Q92953 911 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SGSM3Q96HU1 749 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 DCLK3Q9C098 648 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 METTL5Q9NRN9 209 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 A0A1W2PQC6 194 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TBKBP1A7MCY6 615 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 GLP2RO95838 553 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 VEGFAP15692 232 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 ITGB6P18564 788 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SLC26A2P50443 739 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 ZNF618Q5T7W0 954 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TMEM117Q9H0C3 514 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SPATA31A3Q5VYP0 1347 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 RBAK-RBAKDNI3L0D1 243 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SUPT7LO94864 414 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 OR56A5P0C7T3 313 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 CCR4P51679 360 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 EFEMP1Q12805 493 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SETMARQ53H47 684 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SOCS4Q8WXH5 440 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 HMX1Q9NP08 348 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 NYAP2Q9P242 653 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 DNMT1P26358 1616 aaKnown RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 NEDD4P46934 1319 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TCP11X1B4DZS4 312 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 PDE2AO00408 941 aaPredicted RBP11.54□□□□□ -0.56
SCN4A-201ENST00000435607 IGSF6O95976 241 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 KRT6AP02538 564 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 KRT6BP04259 564 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 KRT6CP48668 564 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 KRT74Q7RTS7 529 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 TBC1D13Q9NVG8 400 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 SH3BP4Q9P0V3 963 aa11.54□□□□□ -0.56
SCN4A-201ENST00000435607 USP6P35125 1406 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 MEI4A8MW99 385 aa11.53□□□□□ -0.56
SCN4A-201ENST00000435607 POU1F1P28069 291 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms