RNA–Protein interactions for RNA: ENST00000434342.5

SEMA3F-206, Transcript of semaphorin 3F, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-206ENST00000434342 TTLL12Q14166 644 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 TFDP1Q14186 410 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 EFTUD2Q15029 972 aaKnown RBP eCLIP12.73□□□□□ -0.373e-6■■■■■ 40.1
SEMA3F-206ENST00000434342 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 ASRGL1Q7L266 308 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 APOBEC3FQ8IUX4 373 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 APLFQ8IW19 511 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 FAM71DQ8N9W8 422 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 CAPN9O14815 690 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 LSM8O95777 96 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 CCDC166P0CW27 439 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 KRT4P19013 534 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 VHLP40337 213 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 LIN52Q52LA3 116 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 SH2D4BQ5SQS7 431 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 ATF7IP2Q5U623 682 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 IER5Q5VY09 327 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 POTEAQ6S8J7 498 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 C3orf62Q6ZUJ4 267 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 KIAA0319LQ8IZA0 1049 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 NRG4Q8WWG1 115 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 DOCK5Q9H7D0 1870 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 CYTH4Q9UIA0 394 aa12.73□□□□□ -0.37
SEMA3F-206ENST00000434342 EIF3FO00303 357 aaPredicted RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 LRCH4O75427 683 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 GRAP2O75791 330 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 GCAP28676 217 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 PSMD7P51665 324 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 VGLL4Q14135 290 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 MORF4L2Q15014 288 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 OASLQ15646 514 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 CDO1Q16878 200 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 ZNF362Q5T0B9 420 aaPredicted RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 RNASEH2BQ5TBB1 312 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 CGB2Q6NT52 195 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 PPP1R2P3Q6NXS1 205 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 METTL7BQ6UX53 244 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 LBX2Q6XYB7 198 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 ECHDC2Q86YB7 292 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 PALM2Q8IXS6 379 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 UBA3Q8TBC4 463 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 TTC25Q96NG3 672 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 CPXM1Q96SM3 734 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 TBC1D10AQ9BXI6 508 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 CPSF3Q9UKF6 684 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 MAP3K6O95382 1288 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 OAS1P00973 400 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 LYNP07948 512 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 HOXC6P09630 235 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 AP3M2P53677 418 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 MGAT5Q09328 741 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 LRRC38Q5VT99 294 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 SPATA33Q96N06 139 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 SPATC1LQ9H0A9 340 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 RPF1Q9H9Y2 349 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 DDX56Q9NY93 547 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 PHTF1Q9UMS5 762 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 IGKV6D-21A0A0A0MT36 114 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 KRT38O76015 456 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 UNC5CO95185 931 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 VAV1P15498 845 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 ASPAP45381 313 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 HPCAP84074 193 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 MTFR1Q15390 333 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 SLC1A5Q15758 541 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 LRRC8BQ6P9F7 803 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 ARFGAP1Q8N6T3 406 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 STOML1Q9UBI4 398 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 HMGXB4Q9UGU5 601 aa12.72□□□□□ -0.37
SEMA3F-206ENST00000434342 ALOX15BO15296 676 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 FAM189A1O60320 539 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 ITGB3P05106 788 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 NFICP08651 508 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 MTTPP55157 894 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 COG7P83436 770 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 DMPKQ09013 629 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 MXD4Q14582 209 aaPredicted RBP12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 MSS51Q4VC12 460 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 FNBP1LQ5T0N5 605 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 UNC45BQ8IWX7 931 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 FBXO16Q8IX29 292 aaPredicted RBP12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 ANKRD27Q96NW4 1050 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 MINDY3Q9H8M7 445 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 PCDH9Q9HC56 1237 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 DRG1Q9Y295 367 aaKnown RBP12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 TSC22D4Q9Y3Q8 395 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 GMEB1Q9Y692 573 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 TCRBV7S3A2A0A539 114 aa12.71□□□□□ -0.37
SEMA3F-206ENST00000434342 TCRBV5S1A1TA0A578 114 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms